RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ERVS71-1P61550 626 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 PPP1CBP62140 327 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 TEKQ02763 1124 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 MAD2L1BPQ15013 274 aaPredicted RBP9.39□□□□□ -0.91
USP49-204ENST00000423567 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
USP49-204ENST00000423567 ZBTB46Q86UZ6 589 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ZNF101Q8IZC7 436 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
USP49-204ENST00000423567 LNX2Q8N448 690 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 OR1F12Q8NHA8 337 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 COG8Q96MW5 612 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 FEVQ99581 238 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 TEX12Q9BXU0 123 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 FN3KQ9H479 309 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 TUBG2Q9NRH3 451 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ATPIF1Q9UII2 106 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 GRIP1Q9Y3R0 1128 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ACANP16112 2415 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 IGLV3-9A0A075B6K5 115 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 PLSCR5A0PG75 271 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 OR6C6A6NF89 314 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 H3BSA7 217 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 DCTN6O00399 190 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 RER1O15258 196 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ICMTO60725 284 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 GPANK1O95872 356 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 CLPTM1O96005 669 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 GAAP10253 952 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 NAT2P11245 290 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ZNF3P17036 446 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 USF1P22415 310 aaPredicted RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 WNT5AP41221 380 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ERFP50548 548 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 PPP2R2BQ00005 443 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 MEP1BQ16820 701 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 PCGF3Q3KNV8 242 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 SPATA46Q5T0L3 261 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 OTPQ5XKR4 325 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ATG16L2Q8NAA4 619 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 CYB561A3Q8NBI2 242 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 NPEPL1Q8NDH3 523 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 SLC26A10Q8NG04 563 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 OR8D4Q8NGM9 314 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 SLC25A40Q8TBP6 338 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 IPCEF1Q8WWN9 437 aaPredicted RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 DCLRE1CQ96SD1 692 aaKnown RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 NIPSNAP1Q9BPW8 284 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 OR2J1Q9GZK6 312 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 HDHD2Q9H0R4 259 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 HINT3Q9NQE9 182 aaKnown RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 CYSLTR2Q9NS75 346 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 TBCCD1Q9NVR7 557 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 ARMC1Q9NVT9 282 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 KIF17Q9P2E2 1029 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 MYEF2Q9P2K5 600 aaKnown RBP9.38□□□□□ -0.91
USP49-204ENST00000423567 KCNG2Q9UJ96 466 aa9.38□□□□□ -0.91
USP49-204ENST00000423567 MTORP42345 2549 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 J3QW42 95 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 TPD52L2O43399 206 aaKnown RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 IGHV3-13P01766 116 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 TFP02787 698 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 IGFBP1P08833 259 aaPredicted RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 PAICSP22234 425 aaKnown RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 POU1F1P28069 291 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 FMO3P31513 532 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 PYCR1P32322 319 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 LIPAP38571 399 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 NR4A2P43354 598 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 RGS6P49758 472 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 BLVRAP53004 296 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 ECH1Q13011 328 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 GGTLC2Q14390 218 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 CCDC92Q53HC0 331 aaPredicted RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 ZMAT1Q5H9K5 638 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 MBNL2Q5VZF2 373 aaKnown RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 SLC27A4Q6P1M0 643 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 RFPL4BQ6ZWI9 263 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 SLC37A3Q8NCC5 494 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 PAPD5Q8NDF8 572 aaKnown RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 OR5L1Q8NGL2 311 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 KLF14Q8TD94 323 aaPredicted RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 NRBF2Q96F24 287 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 MARS2Q96GW9 593 aaKnown RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 PITX2Q99697 317 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 COQ7Q99807 217 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 DECR2Q9NUI1 292 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 CGGBP1Q9UFW8 167 aaPredicted RBP9.37□□□□□ -0.91
USP49-204ENST00000423567 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
USP49-204ENST00000423567 C17orf100A8MU93 164 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms