RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 EDNRAP25101 427 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 TTKP33981 857 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SERPINF1P36955 418 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR1E2P47887 323 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CSNK1A1P48729 337 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 NUDT2P50583 147 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 GZMMP51124 257 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF84P51523 738 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 BIDP55957 195 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SMIM11AP58511 58 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SELENOVP59797 346 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 GALK2Q01415 458 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 POU3F1Q03052 451 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF91Q05481 1191 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CAMK2DQ13557 499 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CLEC12BQ2HXU8 276 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CEACAM16Q2WEN9 425 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 KRTAP24-1Q3LI83 254 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 TBRG1Q3YBR2 411 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 HIKESHIQ53FT3 197 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 KHDC1LQ5JSQ8 128 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 GKAP1Q5VSY0 366 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF544Q6NX49 715 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 C9orf47Q6ZRZ4 202 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 PIWIL3Q7Z3Z3 882 aaKnown RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 NANOGNBQ7Z5D8 188 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 BCDIN3DQ7Z5W3 292 aaKnown RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 DPPA2Q7Z7J5 298 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CALHM3Q86XJ0 350 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 C10orf111Q8N326 155 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MUC15Q8N387 334 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 WDR31Q8NA23 367 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 KBTBD8Q8NFY9 601 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR4F15Q8NGB8 312 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR1K1Q8NGR3 316 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR6X1Q8NH79 312 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MAGEE2Q8TD90 523 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM239Q8WW34 195 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 FAM162AQ96A26 154 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 TAMM41Q96BW9 452 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SGTBQ96EQ0 304 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 TXNDC15Q96J42 360 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MOGAT1Q96PD6 335 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SLC38A2Q96QD8 506 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 RBP7Q96R05 134 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR2M2Q96R28 347 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 KCTD14Q9BQ13 255 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 EMC6Q9BV81 110 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 DPCDQ9BVM2 203 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ULBP2Q9BZM5 246 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 DENND2DQ9H6A0 471 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 RNF121Q9H920 327 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CBLN4Q9NTU7 201 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF701Q9NV72 531 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 NDE1Q9NXR1 346 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 FBXL3Q9UKT7 428 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 USP22Q9UPT9 525 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MOKQ9UQ07 419 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 IGKV1D-42A0A075B6H8 117 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ARPC4-TTLL3A0A0A6YYG9 625 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 AQP12BA6NM10 295 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SHISA9B4DS77 424 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 B9A039 149 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 E7EQL1 145 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PDLIM1O00151 329 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SSX4O60224 188 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SHOX2O60902 331 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF432O94892 652 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 STAMBPO95630 424 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 RAB36O95755 333 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 IGHG1P01857 330 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 GRPP07492 148 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 QDPRP09417 244 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 DANCRP0C864 163 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SAGP10523 405 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PAX1P15863 534 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ITGA2P17301 1181 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PTNP21246 168 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 LOXP28300 417 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PRDX6P30041 224 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 CDKN1AP38936 164 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 DAP3P51398 398 aaKnown RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 P2RY4P51582 365 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 NUDT6P53370 316 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PSME3P61289 254 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 RPS16P62249 146 aaKnown RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SNRPD2P62316 118 aaKnown RBP4.86□□□□□ -1.63
LINC00458-201ENST00000423442 GNGT1P63211 74 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 RUNX1T1Q06455 604 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 LGALS3BPQ08380 585 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ZP4Q12836 540 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 NPRL3Q12980 569 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 TRAM2Q15035 370 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF74Q16587 644 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 GSG1Q2KHT4 349 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 PGGHGQ32M88 737 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 ANKDD1AQ495B1 522 aa4.86□□□□□ -1.63
LINC00458-201ENST00000423442 SLC36A2Q495M3 483 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms