RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GK3PQ14409 553 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 TSTQ16762 297 aaKnown RBP12.94□□□□□ -0.34
USB1-202ENST00000423271 HS3ST5Q8IZT8 346 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 GPX7Q96SL4 187 aaPredicted RBP12.94□□□□□ -0.34
USB1-202ENST00000423271 OR2J1Q9GZK6 312 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 NDEL1Q9GZM8 345 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 OR52D1Q9H346 318 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 NTN4Q9HB63 628 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 LPAR2Q9HBW0 351 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 TIMM10BQ9Y5J6 103 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 CACNG2Q9Y698 323 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
USB1-202ENST00000423271 PRSS37A4D1T9 235 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 DEAF1O75398 565 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 GCH1P30793 250 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 GUCA1AP43080 201 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 TMEM33P57088 247 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 PCBD1P61457 104 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 KRR1Q13601 381 aaKnown RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 RFX4Q33E94 735 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 PCGF3Q3KNV8 242 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 ZNF718Q3SXZ3 478 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 AVPI1Q5T686 147 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 ZNF620Q6ZNG0 422 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 KLF14Q8TD94 323 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 SAMD8Q96LT4 415 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 RAB3IPQ96QF0 476 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 DGCR6LQ9BY27 220 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 NKIRAS2Q9NYR9 191 aa12.93□□□□□ -0.34
USB1-202ENST00000423271 PDP1Q9P0J1 537 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 TMEFF2Q9UIK5 374 aaPredicted RBP12.93□□□□□ -0.34
USB1-202ENST00000423271 ZSCAN5BA6NJL1 495 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 XKRYO14609 159 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 PPP1R3DO95685 299 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 SLC6A6P31641 620 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 ZNF81P51508 661 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 MMP15P51511 669 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 DVL1P1P54792 670 aaPredicted RBP12.92□□□□□ -0.34
USB1-202ENST00000423271 PPP1CBP62140 327 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 ATP6AP1Q15904 470 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 ZSCAN26Q16670 478 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 MBNL2Q5VZF2 373 aaKnown RBP12.92□□□□□ -0.34
USB1-202ENST00000423271 DPY19L2P2Q6ZN68 376 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 USP51Q70EK9 711 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 AMIGO2Q86SJ2 522 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 PYDC1Q8WXC3 89 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 C4orf45Q96LM5 186 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 FEVQ99581 238 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 NIPSNAP1Q9BPW8 284 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 SYT4Q9H2B2 425 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 EGLN3Q9H6Z9 239 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 CDH10Q9Y6N8 788 aa12.92□□□□□ -0.34
USB1-202ENST00000423271 IGHV1-69-2A0A0G2JMI3 117 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 ARRDC5A6NEK1 342 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 B4DSR2 109 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 SOCS2O14508 198 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 TPD52L2O43399 206 aaKnown RBP12.91□□□□□ -0.34
USB1-202ENST00000423271 SPRY3O43610 288 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 DOK2O60496 412 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 ICMTO60725 284 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 TFP02787 698 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 MT-ND5P03915 603 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 GAAP10253 952 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 PRKACGP22612 351 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 FASP25445 335 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 SDHAP31040 664 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 THBS2P35442 1172 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 CRYBB2P43320 205 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 HTR5AP47898 357 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 LMO4P61968 165 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 MVKQ03426 396 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
USB1-202ENST00000423271 MOGQ16653 247 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 RASSF6Q6ZTQ3 369 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 PTCHD4Q6ZW05 846 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 GLCCI1Q86VQ1 547 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 OR8D4Q8NGM9 314 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 LRTOMTQ8WZ04 291 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 REPIN1Q9BWE0 567 aaKnown RBP12.91□□□□□ -0.34
USB1-202ENST00000423271 PLA2G12AQ9BZM1 189 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 RERGLQ9H628 205 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 SAP30LQ9HAJ7 183 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 DECR2Q9NUI1 292 aa12.91□□□□□ -0.34
USB1-202ENST00000423271 AHCYL1O43865 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms