RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ZNF735P0CB33 412 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 ARRB1P49407 418 aaPredicted RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 DHRS2Q13268 280 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 OR52W1Q6IF63 320 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 SLC29A4Q7RTT9 530 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 ADGRE4PQ86SQ3 457 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 ZNF546Q86UE3 836 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 TMEM229BQ8NBD8 167 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 OR13C8Q8NGS7 320 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 VN1R1Q9GZP7 353 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 WDR13Q9H1Z4 485 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 C1orf198Q9H425 327 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 SLC17A5Q9NRA2 495 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 COPS7AQ9UBW8 275 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 OR52A1Q9UKL2 312 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 HHLA2Q9UM44 414 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 RFPL4AA6NLU0 287 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 RFPL4AL1F8VTS6 287 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 ZNF354AO60765 605 aaPredicted RBP14.13□□□□□ -0.15
CDH1-202ENST00000422392 PMS2P2O95744 297 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 FOLR1P15328 257 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 CD38P28907 300 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 ARL4DP49703 201 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 ATXN7L3Q14CW9 347 aaPredicted RBP14.13□□□□□ -0.15
CDH1-202ENST00000422392 CDH26Q8IXH8 852 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 BEST3Q8N1M1 668 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 OR1N1Q8NGS0 311 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 CTSFQ9UBX1 484 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 VDAC3Q9Y277 283 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 R4GMQ9 66 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 A0A1W2PQD3 144 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 RHPN2P1A8MT19 583 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 A8MXK9 166 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 MS4A18H0YCH9 400 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 H3BUI4 141 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 FADS1O60427 444 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 ZNF823P16415 610 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 FBLP22087 321 aaKnown RBP14.13□□□□□ -0.15
CDH1-202ENST00000422392 SLC26A5P58743 744 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 CFHR1Q03591 330 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 UBXN2BQ14CS0 331 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 OR7A5Q15622 319 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 SMAD2Q15796 467 aaKnown RBP14.13□□□□□ -0.15
CDH1-202ENST00000422392 MS4A18Q3C1V0 323 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 GRINAQ7Z429 371 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 NAXDQ8IW45 347 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 SLC26A10Q8NG04 563 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 OR5M9Q8NGP3 310 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 OIT3Q8WWZ8 545 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 ST8SIA4Q92187 359 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 THRSPQ92748 146 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 DAZLQ92904 295 aaKnown RBP14.13□□□□□ -0.15
CDH1-202ENST00000422392 EMC6Q9BV81 110 aa14.13□□□□□ -0.15
CDH1-202ENST00000422392 EXPH5Q8NEV8 1989 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 HLA-AP01891 365 aaKnown RBP14.12□□□□□ -0.15
CDH1-202ENST00000422392 RPA2P15927 270 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 DCAF7P61962 342 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 MPPED2Q15777 294 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 C3orf33Q6P1S2 294 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 PDZD9Q8IXQ8 264 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 BVESQ8NE79 360 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 ST7LQ8TDW4 575 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 CCDC107Q8WV48 283 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 ZDHHC12Q96GR4 267 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 CYYR1Q96J86 154 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 CNTD2Q9H8S5 307 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 ZNF304Q9HCX3 659 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 VSIG4Q9Y279 399 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 NOP16Q9Y3C1 178 aaKnown RBP14.12□□□□□ -0.15
CDH1-202ENST00000422392 ARID1AO14497 2285 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 MYO7BQ6PIF6 2116 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 FTCDNL1E5RQL4 147 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 LDLRAD4O15165 306 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 CALCRP30988 508 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 PNLIPRP2P54317 469 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 POU3F1Q03052 451 aaPredicted RBP14.12□□□□□ -0.15
CDH1-202ENST00000422392 ZMYND11Q15326 602 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 PAPD4Q6PIY7 484 aaKnown RBP14.12□□□□□ -0.15
CDH1-202ENST00000422392 FGGYQ96C11 551 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 DPYSL5Q9BPU6 564 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 NUDT22Q9BRQ3 303 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 SHARPINQ9H0F6 387 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 ALX4Q9H161 411 aaPredicted RBP14.12□□□□□ -0.15
CDH1-202ENST00000422392 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
CDH1-202ENST00000422392 OR5H14A6NHG9 310 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 TTLL8A6PVC2 850 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 H3BML4 177 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 KCNAB3O43448 404 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 FGF2P09038 288 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 FSTP19883 344 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 CRABP1P29762 137 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 GNALP38405 381 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 FBXW4P57775 412 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 SSBP1Q04837 148 aaKnown RBP14.11□□□□□ -0.15
CDH1-202ENST00000422392 CDNFQ49AH0 187 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 RNF144BQ7Z419 303 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 SLC51BQ86UW2 128 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms