RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TGFBR3LH3BV60 316 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 MRPS14O60783 128 aaKnown RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 BCAS1O75363 584 aaPredicted RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 CD59P13987 128 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 GPR155Q7Z3F1 870 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 BBS1Q8NFJ9 593 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 BOD1Q96IK1 185 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 FBXL2Q9UKC9 423 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OSGIN2Q9Y236 505 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 PKDREJQ9NTG1 2253 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 ARRDC5A6NEK1 342 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 INMT-MINDY4F8WBC2 141 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OIP5O43482 229 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 AKR1C4P17516 323 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 UGT2B10P36537 528 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 NUBP1P53384 320 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 LGALS4P56470 323 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 MLF1P58340 268 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 RAC3P60763 192 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF45Q02386 682 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 FMODQ06828 376 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 NDUFA5Q16718 116 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 PLPP7Q8NBV4 271 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 STEAP2Q8NFT2 490 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OR2M7Q8NG81 312 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 SYNPRQ8TBG9 265 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 RPL3LQ92901 407 aaKnown RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM43Q9BTV4 400 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 GPR173Q9NS66 373 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 ACOXLQ9NUZ1 547 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 MRPS28Q9Y2Q9 187 aaKnown RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 A0A1B0GTH9 108 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 CDC42EP2O14613 210 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 HLA-HP01893 362 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 CSRP1P21291 193 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SNRPGP62308 76 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 GPR176Q14439 515 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 PCGF3Q3KNV8 242 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 PXKQ7Z7A4 578 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 FJX1Q86VR8 437 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 FAM26EQ8N5C1 309 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 CPEB3Q8NE35 698 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 OR4K15Q8NH41 348 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 WFDC6Q9BQY6 131 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 CACNG6Q9BXT2 260 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 HES7Q9BYE0 225 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 NAA50Q9GZZ1 169 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF221Q9UK13 617 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 DIMT1Q9UNQ2 313 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 B9D1Q9UPM9 204 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 HELZP42694 1942 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 DENND4CQ5VZ89 1909 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 LOC101059948A0A1B0GTJ6 334 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SHC1P29353 583 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 BLVRBP30043 206 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 VEGFCP49767 419 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 MGAT2Q10469 447 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 GSG1Q2KHT4 349 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 ALKBH6Q3KRA9 238 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 DCDC5Q6ZRR9 648 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 CMTM1Q8IZ96 169 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 RDH10Q8IZV5 341 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM185AQ8NFB2 350 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SYT3Q9BQG1 590 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 B3GNT2Q9NY97 397 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 BHLHE40O14503 412 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 RGS7BPQ6MZT1 257 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 TMPRSS11FQ6ZWK6 438 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 FAM83FQ8NEG4 500 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SPACA5Q96QH8 159 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 FXYD6Q9H0Q3 95 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 GPR84Q9NQS5 396 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 TAS2R8Q9NYW2 309 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 IL20Q9NYY1 176 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 GDF2Q9UK05 429 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SIGLEC7Q9Y286 467 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 NCOR2Q9Y618 2525 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 LOC107986453A0A1B0GWG9 222 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 BET1O15155 118 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 RAB3DO95716 219 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 PIPP12273 146 aaPredicted RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 RAB2AP61019 212 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 RPS25P62851 125 aaKnown RBP8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SLC35A2P78381 396 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 LTBQ06643 244 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF554Q86TJ5 538 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 SULF2Q8IWU5 870 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 THAP6Q8TBB0 222 aa8.73□□□□□ -1.01
CMSS1-201ENST00000421999 ANKRD61A6NGH8 418 aa8.72□□□□□ -1.01
CMSS1-201ENST00000421999 PRSS23O95084 383 aa8.72□□□□□ -1.01
CMSS1-201ENST00000421999 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
CMSS1-201ENST00000421999 HTR2CP28335 458 aa8.72□□□□□ -1.01
CMSS1-201ENST00000421999 CHRNB4P30926 498 aa8.72□□□□□ -1.01
CMSS1-201ENST00000421999 NTRK2Q16620 822 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms