RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 CORO6Q6QEF8 472 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF550Q7Z398 422 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 C15orf54Q8N8G6 183 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 ADIPOR1Q96A54 375 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 DERL3Q96Q80 235 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 CNN2Q99439 309 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 LPAR4Q99677 370 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 POTEKPQ9BYX7 375 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 AKIRIN1Q9H9L7 192 aaPredicted RBP13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 OR5V1Q9UGF6 321 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 PCDHB10Q9UN67 800 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 NCOR1O75376 2440 aa13.3□□□□□ -0.28
SEMA4D-204ENST00000420101 TRAV14DV4A0A0A6YYC5 116 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SERINC4A6NH21 518 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR5H14A6NHG9 310 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 VSTM2BA6NLU5 285 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 UTS2O95399 124 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 IL33O95760 270 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 THY1P04216 161 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ITGB2P05107 769 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ABOP16442 354 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ACTBP60709 375 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ACTG1P63261 375 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 BLOC1S1P78537 153 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PCGF3Q3KNV8 242 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC35D3Q5M8T2 416 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 C5orf46Q6UWT4 87 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 CPEB2Q7Z5Q1 589 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SUMF1Q8NBK3 374 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR4C16Q8NGL9 310 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PHOSPHO1Q8TCT1 267 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 THAP3Q8WTV1 239 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 TMEM239Q8WW34 195 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 WDR89Q96FK6 387 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR14A2Q96R54 314 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SPSB2Q99619 263 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PRSS27Q9BQR3 290 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR51V1Q9H2C8 321 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 TMEM185BQ9H7F4 350 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 MED20Q9H944 212 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 UBQLN4Q9NRR5 601 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 TMEM100Q9NV29 134 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 DNAJB12Q9NXW2 375 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PISDQ9UG56 409 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 NXT1Q9UKK6 140 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ICAM5Q9UMF0 924 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 B4E171 279 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PIP5K1CO60331 668 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 NTN1O95631 604 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 CD79AP11912 226 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 EDNRAP25101 427 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC6A6P31641 620 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PMELP40967 661 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 TSPAN7P41732 249 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 CCR4P51679 360 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC16A1P53985 500 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 FXYD6P3P58550 94 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 PNLIPRP3Q17RR3 467 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 H3F3CQ6NXT2 135 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 DRAM2Q6UX65 266 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 DND1Q8IYX4 353 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 OR13C5Q8NGS8 318 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 RNF141Q8WVD5 230 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 MESP1Q9BRJ9 268 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 HCAR1Q9BXC0 346 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SLCO5A1Q9H2Y9 848 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 B3GALT1Q9Y5Z6 326 aa13.29□□□□□ -0.28
SEMA4D-204ENST00000420101 TRAV20A0A0B4J274 112 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 C5orf52A6NGY3 159 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 C1orf196B1AJZ1 125 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 ONECUT2O95948 504 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 LUMP51884 338 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 RNF4P78317 190 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 INSM1Q01101 510 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 PEA15Q15121 130 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 C4orf46Q504U0 113 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 DCAF12L2Q5VW00 463 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 MRPL14Q6P1L8 145 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 TMEM41AQ96HV5 264 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 VRK1Q99986 396 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF471Q9BX82 626 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 DPH1Q9BZG8 443 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC26A1Q9H2B4 701 aa13.28□□□□□ -0.28
SEMA4D-204ENST00000420101 CCDC86Q9H6F5 360 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms