RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 OPRM1P35372 400 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 RIDAP52758 137 aaKnown RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 PER3P56645 1201 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 GRB2P62993 217 aaKnown RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 SGCAQ16586 387 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 CTF1Q16619 201 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 FOXB2Q5VYV0 432 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLC16A12Q6ZSM3 486 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 KLBQ86Z14 1044 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 C17orf78Q8N4C9 275 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 GALNT11Q8NCW6 608 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR10S1Q8NGN2 331 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLAMF6Q96DU3 332 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 DMRTA2Q96SC8 542 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 ACOXLQ9NUZ1 547 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 RSL24D1Q9UHA3 163 aaKnown RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 GNG8Q9UK08 70 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 TIMM10BQ9Y5J6 103 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 COL12A1Q99715 3063 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 MSTNO14793 375 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 SC5DO75845 299 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 APOC1P02654 83 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ITGA5P08648 1049 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 RPS27P42677 84 aaKnown RBP12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 CA7P43166 264 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 CASP6P55212 293 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ARF1P84077 181 aaKnown RBP12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 FAPQ12884 760 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 FOXF2Q12947 444 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 TSTQ16762 297 aaKnown RBP12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 TP53I3Q53FA7 332 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF544Q6NX49 715 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 BTLAQ7Z6A9 289 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 KRT77Q7Z794 578 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR1K1Q8NGR3 316 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 BCL2L2Q92843 193 aaPredicted RBP12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ITFG2Q969R8 447 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ISOC1Q96CN7 298 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 FOXN4Q96NZ1 517 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 KCNN2Q9H2S1 579 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 MOB1AQ9H8S9 216 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 ELOVL3Q9HB03 270 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 PRSS50Q9UI38 385 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 PROCRQ9UNN8 238 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
SHMT1P1-201ENST00000419974 LRRK2Q5S007 2527 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR6C6A6NF89 314 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 E9PI62 339 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLC22A1O15245 554 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SYNGR3O43761 229 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 HLA-DPB1P04440 258 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 ISG15P05161 165 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 CELP19835 753 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 ARR3P36575 388 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 CRYBB2P43320 205 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 RAB35Q15286 201 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 CCDC92Q53HC0 331 aaPredicted RBP12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 ELFN2Q5R3F8 820 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 GPR107Q5VW38 600 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 LIPKQ5VXJ0 399 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 VWA1Q6PCB0 445 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SLC16A14Q7RTX9 510 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 CLVS1Q8IUQ0 354 aaPredicted RBP12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 LINC00346Q8IVM7 164 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 UBE2J2Q8N2K1 259 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 FAM169BQ8N8A8 192 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 YIPF7Q8N8F6 280 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 NAXEQ8NCW5 288 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 HDHD5Q9BXW7 423 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR10A4Q9H209 315 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF224Q9NZL3 707 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 STUB1Q9UNE7 303 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 SIRT4Q9Y6E7 314 aaPredicted RBP12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 R4GMQ9 66 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
SHMT1P1-201ENST00000419974 PTPN13Q12923 2485 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms