RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 CTXN1P60606 82 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 ESRRGP62508 458 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 DPY19L2P2Q6ZN68 376 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF620Q6ZNG0 422 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 IL17RDQ8NFM7 739 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 OR6N1Q8NGY5 312 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 MOSPD2Q8NHP6 518 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 RDH12Q96NR8 316 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 GPX7Q96SL4 187 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-202ENST00000416769 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
LINC00339-202ENST00000416769 INIPQ9NRY2 104 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 OPN4Q9UHM6 478 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 PPIAL4AQ9Y536 164 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 ORC6Q9Y5N6 252 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 A0A1W2PRG6 482 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 H0YJX3 145 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 IMPA2O14732 288 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 MITFO75030 526 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-202ENST00000416769 RAB36O95755 333 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 CD14P08571 375 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 PCMT1P22061 227 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 SLC6A6P31641 620 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 BIDP55957 195 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 MELKQ14680 651 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 NKPD1Q17RQ9 610 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 GALNT4Q8N4A0 578 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 VCXQ9H320 206 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 EGLN3Q9H6Z9 239 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 NRIP3Q9NQ35 241 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 DCAF16Q9NXF7 216 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 BAIAP2Q9UQB8 552 aa10.97□□□□□ -0.65
LINC00339-202ENST00000416769 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 H3BN98 237 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 ARPC3O15145 178 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TMPRSS2O15393 492 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 IDH3BO43837 385 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 IGHMP01871 453 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 F13BP05160 661 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 RPL4P36578 427 aaKnown RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TMEM33P57088 247 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 CDK5Q00535 292 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 MYBPC1Q00872 1141 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 GALK2Q01415 458 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TSTQ16762 297 aaKnown RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 CCDC36Q8IYA8 594 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 HINT3Q9NQE9 182 aaKnown RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
LINC00339-202ENST00000416769 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-202ENST00000416769 WNK1Q9H4A3 2382 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 MCIDASD6RGH6 385 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SOX14O95416 240 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 TXNDC12O95881 172 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 BCL10O95999 233 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 FSHBP01225 129 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SERPINA5P05154 406 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 POU1F1P28069 291 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 RPL27P61353 136 aaKnown RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 GINS1Q14691 196 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 PTGES3Q15185 160 aaKnown RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SNCBQ16143 134 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SPATA46Q5T0L3 261 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 GPR139Q6DWJ6 353 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 ACSM5Q6NUN0 579 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 UGT2A3Q6UWM9 527 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 USP51Q70EK9 711 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 USP43Q70EL4 1123 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms