RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 H0YIZ8 118 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 USF2Q15853 346 aaPredicted RBP13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 RPL7L1Q6DKI1 246 aaKnown RBP13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 UNQ6494/PRO21346Q6UXR6 183 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR10D4PQ8NGN7 298 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 NUS1Q96E22 293 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF681Q96N22 645 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 GSKIPQ9P0R6 139 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 AMDHD2Q9Y303 409 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A1B0GTQ1 180 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 MFNGO00587 321 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 S100A10P60903 97 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 HNRNPA1L2Q32P51 320 aaKnown RBP13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 MOGAT2Q3SYC2 334 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TMEM31Q5JXX7 168 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 Q6ZRG5 221 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 LRRC25Q8N386 305 aaPredicted RBP13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 CHST4Q8NCG5 386 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 MITD1Q8WV92 249 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR8D1Q8WZ84 308 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 LURAP1Q96LR2 239 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 FOXN4Q96NZ1 517 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 EIF5A2Q9GZV4 153 aaKnown RBP13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR5AC2Q9NZP5 309 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SERGEFQ9UGK8 458 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 LAMP5Q9UJQ1 280 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SERTAD3Q9UJW9 196 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SPINT1O43278 529 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 UPK3AO75631 287 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ADAP1O75689 374 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 STK17BO94768 372 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF432O94892 652 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 KAT7O95251 611 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 PCCBP05166 539 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 GGTLC2Q14390 218 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 GLYATL3Q5SZD4 288 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 CLEC9AQ6UXN8 241 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 BEND4Q6ZU67 534 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF563Q8TA94 476 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 PPP1R14AQ96A00 147 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SUCNR1Q9BXA5 334 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OPA3Q9H6K4 179 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 KLK13Q9UKR3 277 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 KPTNQ9Y664 436 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 MUC3AQ02505 3323 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ARGFXA6NJG6 315 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 CCDC85CA6NKD9 419 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR52A4PA6NMU1 304 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 GPANK1O95872 356 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ADRB3P13945 408 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SQSTM1Q13501 440 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 RUNX3Q13761 415 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 LRRC69Q6ZNQ3 347 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 DPY19L4Q7Z388 723 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC25A42Q86VD7 318 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 TAF9BQ9HBM6 251 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR1A2Q9Y585 309 aa13.26□□□□□ -0.29
NCKIPSD-204ENST00000416649 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 P2RX6O15547 441 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 PRKNO60260 465 aaPredicted RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 IFNA17P01571 189 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 THBS1P07996 1170 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 MAP3K8P41279 467 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 PPICP45877 212 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 EIF1AXP47813 144 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 NAAAQ02083 359 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SRSF4Q08170 494 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SRSF5Q13243 272 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 FHL1Q13642 323 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 TMEM35AQ53FP2 167 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 DRAM2Q6UX65 266 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 JAGN1Q8N5M9 183 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 CCDC54Q8NEL0 328 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR2L5Q8NG80 312 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR51F2Q8NH61 342 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 RNASE11Q8TAA1 199 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZCCHC10Q8TBK6 192 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 TGM7Q96PF1 710 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 RBM14Q96PK6 669 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SMIM3Q9BZL3 60 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A087WV62 115 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms