RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 MCRIP1C9JLW8 97 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 ZFAND5O76080 213 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 UTS2O95399 124 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 MLF1P58340 268 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 B3GNTL1Q67FW5 361 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 DPY19L2P2Q6ZN68 376 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 C22orf15Q8WYQ4 148 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 IL20Q9NYY1 176 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 PCBP3P57721 371 aaKnown RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 SNTB1Q13884 538 aaKnown RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 RNLSQ5VYX0 342 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 OR8G2PQ6IF36 304 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 NPSR1Q6W5P4 371 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 PPP1R35Q8TAP8 253 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 GNG12Q9UBI6 72 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 GCM2O75603 506 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 IGHV3-9P01782 118 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 GIPP09681 153 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-202ENST00000415950 FOLR1P15328 257 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 C4orf17Q53FE4 359 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 BAGE2Q86Y30 109 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 NKX2-4Q9H2Z4 354 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 KCNK15Q9H427 330 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 SPACA1Q9HBV2 294 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 CSAG2Q9Y5P2 127 aa11.75□□□□□ -0.53
SCN1B-202ENST00000415950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 IGHV3-20A0A0C4DH32 117 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ADRB1P08588 477 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 SNCAP37840 140 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 VHLLQ6RSH7 139 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ADGRE4PQ86SQ3 457 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 CLEC1AQ8NC01 280 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ANKRD10Q9NXR5 420 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 NBASA2RRP1 2371 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 FAM221AA4D161 298 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 CLN5O75503 358 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 GLCEO94923 617 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 SLC6A1P30531 599 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 RAB38P57729 211 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 TMEM215Q68D42 235 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 MED18Q9BUE0 208 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 TRAF4Q9BUZ4 470 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 TAF9BQ9HBM6 251 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 LOC102725191A0A1B0GVB3 256 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF724A8MTY0 619 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 PTGER4P35408 488 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 CSNK1EP49674 416 aaKnown RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 HAGHQ16775 308 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ZXDCQ2QGD7 858 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 STAC2Q6ZMT1 411 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 TMEM123Q8N131 208 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 OR51A4Q8NGJ6 313 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 NANOS1Q8WY41 292 aaKnown RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 OR1E3Q8WZA6 343 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 AIPO00170 330 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 MRPL33O75394 65 aaKnown RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ZFPL1O95159 310 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 PTAFRP25105 342 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 OPRM1P35372 400 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 P2RX1P51575 399 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ARG2P78540 354 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 BTG2P78543 158 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 MSMO1Q15800 293 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 FAM26DQ5JW98 314 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 HIST2H3AQ71DI3 136 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 AAED1Q7RTV5 226 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 PPP1R1CQ8WVI7 109 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 SLC25A19Q9HC21 320 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 BCL2L10Q9HD36 194 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 TAS2R4Q9NYW5 299 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 KCNG2Q9UJ96 466 aa11.74□□□□□ -0.53
SCN1B-202ENST00000415950 MCTS1Q9ULC4 181 aaKnown RBP11.74□□□□□ -0.53
SCN1B-202ENST00000415950 XRCC3O43542 346 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 TUSC2O75896 110 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 HPNP05981 417 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 BCKDHBP21953 392 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 BAXQ07812 192 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 RUNX2Q13950 521 aa11.73□□□□□ -0.53
SCN1B-202ENST00000415950 LGALSLQ3ZCW2 172 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms