RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TMEM225Q6GV28 225 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 VMO1Q7Z5L0 202 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 VRK2Q86Y07 508 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 ANKMY2Q8IV38 441 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 CMTM4Q8IZR5 234 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 RBM15BQ8NDT2 890 aaKnown RBP4.9□□□□□ -1.62
LMBR1-204ENST00000415428 ZNF417Q8TAU3 575 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 ZNF587Q96SQ5 575 aaPredicted RBP4.9□□□□□ -1.62
LMBR1-204ENST00000415428 PRSS27Q9BQR3 290 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 ULBP2Q9BZM5 246 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 SLC7A7Q9UM01 511 aa4.9□□□□□ -1.62
LMBR1-204ENST00000415428 POLR3HQ9Y535 204 aaPredicted RBP4.9□□□□□ -1.62
LMBR1-204ENST00000415428 A6NIZ1 184 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 TMEM210A6NLX4 147 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 M0QZK8 103 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 APLNRP35414 380 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 RAP1BP61224 184 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 RAP1AP62834 184 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 NPRL3Q12980 569 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 TNFAIP8L3Q5GJ75 292 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 TEX30Q5JUR7 227 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 ZNF770Q6IQ21 691 aaPredicted RBP4.9□□□□□ -1.63
LMBR1-204ENST00000415428 VPS11Q9H270 941 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 DPH5Q9H2P9 285 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 POFUT1Q9H488 388 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 ANKRD19PQ9H560 264 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 PNRC2Q9NPJ4 139 aaKnown RBP4.9□□□□□ -1.63
LMBR1-204ENST00000415428 PFDN4Q9NQP4 134 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 SOX21Q9Y651 276 aaPredicted RBP4.9□□□□□ -1.63
LMBR1-204ENST00000415428 FAT3Q8TDW7 4589 aa4.9□□□□□ -1.63
LMBR1-204ENST00000415428 TRAV38-1A0A0B4J264 116 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 RNF103-CHMP3A0A140T963 221 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 PRORSD1PA6NEY8 169 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 C12orf71A8MTZ7 269 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ACADSP16219 412 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ECH1Q13011 328 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 PCLAFQ15004 111 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 RSPO1Q2MKA7 263 aaPredicted RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 CCDC92Q53HC0 331 aaPredicted RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 FGD3Q5JSP0 725 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 C9orf66Q5T8R8 295 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 GATSQ8NAP1 163 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 OR1J1Q8NGS3 322 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 MS4A3Q96HJ5 214 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 TSPAN32Q96QS1 320 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 TMEM109Q9BVC6 243 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 TXNIPQ9H3M7 391 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 NANOGQ9H9S0 305 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 CD28P10747 220 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ZNF84P51523 738 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 RPL23AP62750 156 aaKnown RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 AQP6Q13520 282 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 TTMPQ5BVD1 217 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 METTL11BQ5VVY1 283 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 MRPL41Q8IXM3 137 aaKnown RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 OR52P1PQ8NH57 321 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ZNF566Q969W8 418 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 PAFAH2Q99487 392 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 POLE4Q9NR33 117 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 A0A087WUV0 522 aaPredicted RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 NME6O75414 186 aaPredicted RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 E2F6O75461 281 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 TRMUO75648 421 aaKnown RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 RPS2P15880 293 aaKnown RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 LMO1P25800 156 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 GIPRP48546 466 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 SLC18A1P54219 525 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ESRRGP62508 458 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 CCL8P80075 99 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 RBBP4Q09028 425 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 SELPLGQ14242 412 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 NPTX1Q15818 432 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ZNF626Q68DY1 528 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 FAM122BQ7Z309 247 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ANKFN1Q8N957 763 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 OR7A2PQ8NGA2 310 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 OR5L1Q8NGL2 311 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 OR5D13Q8NGL4 314 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ZNF563Q8TA94 476 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 CPPED1Q9BRF8 314 aaPredicted RBP4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ERVK-18Q9QC07 812 aa4.89□□□□□ -1.63
LMBR1-204ENST00000415428 ACOD1A6NK06 481 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 SIGLEC5O15389 551 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 IGHV3-9P01782 118 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 DCTDP32321 178 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 SLC9A3P48764 834 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 CNN3Q15417 329 aaKnown RBP4.88□□□□□ -1.63
LMBR1-204ENST00000415428 PABPC1L2AQ5JQF8 200 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 OSR2Q8N2R0 312 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 SDR9C7Q8NEX9 313 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 APOBEC3DQ96AK3 386 aaPredicted RBP4.88□□□□□ -1.63
LMBR1-204ENST00000415428 DESI2Q9BSY9 194 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 CENPHQ9H3R5 247 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 PCDHB16Q9NRJ7 776 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 AIG1Q9NVV5 245 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 ZIM2Q9NZV7 527 aa4.88□□□□□ -1.63
LMBR1-204ENST00000415428 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms