RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TAF6P49848 677 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 RPL14P50914 215 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 CDH4P55283 916 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ADARB1P78563 741 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 INCA1Q0VD86 236 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 RIGQ13278 110 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CTRB2Q6GPI1 263 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CNIH2Q6PI25 160 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR2Y1Q8NGV0 311 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZNF502Q8TBZ5 544 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MCEEQ96PE7 176 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZNF385AQ96PM9 386 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 RARRES2Q99969 163 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OSBPL10Q9BXB5 764 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MAP1LC3CQ9BXW4 147 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 DERL2Q9GZP9 239 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ELOVL4Q9GZR5 314 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLITRK2Q9H156 845 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 GBA3Q9H227 469 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 GAL3ST2Q9H3Q3 398 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 EML4Q9HC35 981 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 MRM3Q9HC36 420 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 TIGARQ9NQ88 270 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 NANSQ9NR45 359 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CACNG5Q9UF02 275 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OARD1Q9Y530 152 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CFAP46Q8IYW2 2715 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CFAP47Q6ZTR5 3102 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 TRAV19A0A0A6YYK7 116 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 IQANK1A0A1B0GTG1 560 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 INPP4BO15327 924 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PRKYO43930 277 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLC19A2O60779 497 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PROSCO94903 275 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PRSS1P07477 247 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 TBXA2RP21731 343 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 GABRR2P28476 465 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MARCKSL1P49006 195 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PRKXP51817 358 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MRPS25P82663 173 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 GOLGA7BQ2TAP0 167 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CRIP3Q6Q6R5 217 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 UNC93AQ86WB7 457 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 KRT222Q8N1A0 295 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR2L13Q8N349 312 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MREGQ8N565 214 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR9G4Q8NGQ1 327 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR52E5Q8NH55 327 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 IFT81Q8WYA0 676 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 RPEQ96AT9 228 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CYTH2Q99418 400 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MRPL45Q9BRJ2 306 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 OPN3Q9H1Y3 402 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 FAM49BQ9NUQ9 324 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CYB5R1Q9UHQ9 305 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 NAGKQ9UJ70 344 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 UTP11Q9Y3A2 253 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 SCN1AP35498 2009 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SIGLEC16A6NMB1 481 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLCO1B7G3V0H7 640 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PIRO00625 290 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR7A17O14581 309 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 RAD51CO43502 376 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ENTPD5O75356 428 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 NADKO95544 446 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 FCGR3AP08637 254 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PSKH1P11801 424 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CA6P23280 308 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CHRNB4P30926 498 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 HOXA1P49639 335 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 ATP4BP51164 291 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MAP3K7CLP57077 242 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 DR1Q01658 176 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZNF33BQ06732 778 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 KIAA0141Q14154 515 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 FASTKD3Q14CZ7 662 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZSCAN26Q16670 478 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PTPN20Q4JDL3 420 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 LGSNQ5TDP6 509 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 H3F3CQ6NXT2 135 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 LCLAT1Q6UWP7 414 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 Q6ZRP5 223 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLC16A14Q7RTX9 510 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 H2BFWTQ7Z2G1 175 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PAQR7Q86WK9 346 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLC13A5Q86YT5 568 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 PUSL1Q8N0Z8 303 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZNRF1Q8ND25 227 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR2AP1Q8NGE2 309 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR2L2Q8NH16 312 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 OR4C6Q8NH72 309 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MAGOHBQ96A72 148 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZBTB9Q96C00 473 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 B3GALT6Q96L58 329 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CABLES2Q9BTV7 478 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 COMMD4Q9H0A8 199 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CXCL16Q9H2A7 254 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 GOLGA2P5Q9HBQ8 144 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ZBTB20Q9HC78 741 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 KCNJ16Q9NPI9 418 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms