RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
RAPGEF1-204ENST00000414781 LILRA1O75019 489 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 TRMUO75648 421 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 KRT33AO76009 404 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 GUCA1AP43080 201 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 OR3A2P47893 321 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 CSNK1A1P48729 337 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ZNF83P51522 516 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC25A1P53007 311 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ZNF362Q5T0B9 420 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 NXNL2Q5VZ03 156 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 GID4Q8IVV7 300 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ENTHD1Q8IYW4 607 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC37A3Q8NCC5 494 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 NPEPL1Q8NDH3 523 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 APH1AQ96BI3 265 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 OTULINQ96BN8 352 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 RASD2Q96D21 266 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 CNBD2Q96M20 576 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 OR2M2Q96R28 347 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 IL4I1Q96RQ9 567 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 NMNAT3Q96T66 252 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 EMC6Q9BV81 110 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 MRPL13Q9BYD1 178 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 LINC00470Q9BZP3 86 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ASB6Q9NWX5 421 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 VSX1Q9NZR4 365 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 ING1Q9UK53 422 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 LRCH1Q9Y2L9 728 aa11.68□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC22A23A1A5C7 686 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 PRODHO43272 600 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 PRKYO43930 277 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 ZNF432O94892 652 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CLIC3O95833 236 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 GNAO1P09471 354 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CDKN2AP42771 156 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CXCR4P61073 352 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CD47Q08722 323 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CAMK2DQ13557 499 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CRMP1Q14194 572 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 MELKQ14680 651 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 MAD2L1BPQ15013 274 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 MESTQ5EB52 335 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 PLBD1Q6P4A8 553 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 LSRQ86X29 649 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CPOQ8IVL8 374 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 GPR137CQ8N3F9 429 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 FBXO17Q96EF6 278 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 YTHDF1Q9BYJ9 559 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 GLTPQ9NZD2 209 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 UPB1Q9UBR1 384 aa11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAPGEF1-204ENST00000414781 CMYA5Q8N3K9 4069 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC22A31A6NKX4 558 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 KHDRBS3O75525 346 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC2A10O95528 541 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 PGA4P0DJD7 388 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 PGA3P0DJD8 388 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 UBA52P62987 128 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC35D3Q5M8T2 416 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 LCN1P1Q5VSP4 162 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 CARD17Q5XLA6 110 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 TMEM123Q8N131 208 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SYT14Q8NB59 555 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 NOXO1Q8NFA2 376 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 FBLIM1Q8WUP2 373 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 HDAC2Q92769 488 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 DDOQ99489 341 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLITRK2Q9H156 845 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SYT4Q9H2B2 425 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 DDX28Q9NUL7 540 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 HIF1ANQ9NWT6 349 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 BLOC1S6Q9UL45 172 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 RPL36Q9Y3U8 105 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC25A15Q9Y619 301 aa11.66□□□□□ -0.54
RAPGEF1-204ENST00000414781 IRGMA1A4Y4 181 aa11.65□□□□□ -0.54
RAPGEF1-204ENST00000414781 M0R1B8 84 aa11.65□□□□□ -0.54
RAPGEF1-204ENST00000414781 SLC16A7O60669 478 aa11.65□□□□□ -0.54
RAPGEF1-204ENST00000414781 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-204ENST00000414781 QDPRP09417 244 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms