RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C1QL3Q5VWW1 255 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TEX261Q6UWH6 196 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 UGT2A3Q6UWM9 527 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TOMM20LQ6UXN7 152 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 UNQ6126/PRO20091Q6UXV3 157 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF782Q6ZMW2 699 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 Q6ZPA2 131 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 Q6ZRM9 215 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 C19orf35Q6ZS72 473 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 Q6ZSR9 355 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MON1BQ7L1V2 547 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ASRGL1Q7L266 308 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SLC29A4Q7RTT9 530 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ASCL5Q7RTU5 278 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MAVSQ7Z434 540 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CLEC14AQ86T13 490 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GLCCI1Q86VQ1 547 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DOLPP1Q86YN1 238 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PDZD9Q8IXQ8 264 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 D2HGDHQ8N465 521 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF557Q8N988 423 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR52I1Q8NGK6 324 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR6N1Q8NGY5 312 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR6F1Q8NGZ6 308 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR4C6Q8NH72 309 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR56B4Q8NH76 319 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 LYPD6BQ8NI32 183 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GNPDA2Q8TDQ7 276 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 C2CD4CQ8TF44 421 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 NPRL2Q8WTW4 380 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DCAKDQ8WVC6 231 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RBPMSQ93062 196 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SEH1LQ96EE3 360 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MRPL53Q96EL3 112 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PAGE5Q96GU1 130 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CXorf58Q96LI9 332 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR7D2Q96RA2 312 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CPXM1Q96SM3 734 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DDOQ99489 341 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FMO2Q99518 471 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ATF6BQ99941 703 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 URM1Q9BTM9 101 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 NUDT9Q9BW91 350 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 VN1R1Q9GZP7 353 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DSN1Q9H410 356 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CDH20Q9HBT6 801 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ADGRL4Q9HBW9 690 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FBXO6Q9NRD1 293 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FOXJ2Q9P0K8 574 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FBXO4Q9UKT5 387 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SLC45A2Q9UMX9 530 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DHDHQ9UQ10 334 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PSG8Q9UQ74 426 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RNF6Q9Y252 685 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FAM96BQ9Y3D0 163 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CNTNAP1P78357 1384 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GRIN2BQ13224 1484 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MBD5Q9P267 1494 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CEP164Q9UPV0 1460 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 DAPK1P53355 1430 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CD109Q6YHK3 1445 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SETD5Q9C0A6 1442 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PTPRJQ12913 1337 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 KIF21AQ7Z4S6 1674 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ABCC10Q5T3U5 1492 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TRBV4-1A0A0J9YWV2 114 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DS1A0A191URI9 304 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 A0A1W2PPK0 400 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 RPS10-NUDT3A0A1W2PQS6 291 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TRAPPC13A5PLN9 417 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NKX2-6A6NCS4 301 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM8BA6NDV4 472 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CCDC182A6NF36 153 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TVP23AA6NH52 213 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 EIF4E1BA6NMX2 242 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 F6UZH7 168 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DS3K7RE56 304 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR7A17O14581 309 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MSH4O15457 936 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 P2RX6O15547 441 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ORC5O43913 435 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZG16O60844 167 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 FOXH1O75593 365 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 STK16O75716 305 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 C6orf47O95873 294 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NUDT3O95989 172 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TOMM40O96008 361 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CRYAAP02489 173 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GIPP09681 153 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 HIST1H2AGP0C0S8 130 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SP9P0CG40 484 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ENGP17813 658 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CBLP22681 906 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SLC2A5P22732 501 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 AADACP22760 399 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NMBRP28336 390 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NTSP30990 170 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 FGF9P31371 208 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms