RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 A0A0J9YY10 115 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 UTS2O95399 124 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 HOXB2P14652 356 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ANOS1P23352 680 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM17Q86X19 198 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 DCUN1D4Q92564 292 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 GPX7Q96SL4 187 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ABHD6Q9BV23 337 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 POTEKPQ9BYX7 375 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 HRH4Q9H3N8 390 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 CENPMQ9NSP4 180 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 CYB5R1Q9UHQ9 305 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 B4DGG1 531 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 PRKXP51817 358 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 BIKQ13323 160 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 GPM6BQ13491 265 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 TGIF1Q15583 401 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 MPPED2Q15777 294 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 PAN3Q58A45 887 aaKnown RBP13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 MARCH1Q8TCQ1 289 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 METTL21AQ8WXB1 218 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 TSLPQ969D9 159 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 SOX7Q9BT81 388 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 A0A0D9SG52 128 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 XKRYO14609 159 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 OPN1LWP04000 364 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 CLPSP04118 112 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 PVALBP20472 110 aaPredicted RBP13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 DNASE1L1P49184 302 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 FAM166AQ6J272 317 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF584Q8IVC4 421 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 OR4A4PQ8NGN8 299 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 MESP1Q9BRJ9 268 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 NICN1Q9BSH3 213 aa13.08□□□□□ -0.32
SEMA3F-202ENST00000413852 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 SPP1P10451 314 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 SERPINF1P36955 418 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF117Q03924 483 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 RASGEF1BQ0VAM2 473 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 INPP5JQ15735 1006 aaPredicted RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 H3F3CQ6NXT2 135 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC22A18ASQ8N1D0 253 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 MAFIPQ8WZ33 124 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 HOXB13Q92826 284 aaPredicted RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 LRFN5Q96NI6 719 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 C9orf170A2RU37 121 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 OR14I1A6ND48 311 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 H0YIZ8 118 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF208O43345 1280 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 WDPCPO95876 746 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ZBTB25P24278 435 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 GNALP38405 381 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 OR1D4P47884 311 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 VEGFBP49765 207 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ACTBP60709 375 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ACTG1P63261 375 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC29A4Q7RTT9 530 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ARMC10Q8N2F6 343 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 GTPBP8Q8N3Z3 284 aaPredicted RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM229BQ8NBD8 167 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 NUBPLQ8TB37 319 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 FGGYQ96C11 551 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 MAP3K3Q99759 626 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 MKL2Q9ULH7 1088 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 A0A1W2PP11 408 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 SCDO00767 359 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 LINC01565O15544 149 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF264O43296 627 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 CD8AP01732 235 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ELOCQ15369 112 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 ACOT7LQ6ZUV0 252 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 OR52N4Q8NGI2 321 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 THAP6Q8TBB0 222 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 C15orf40Q8WUR7 153 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 MRI1Q9BV20 369 aa13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
SEMA3F-202ENST00000413852 LOC107986453A0A1B0GWG9 222 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 STK17BO94768 372 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 TPPPO94811 219 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 CA3P07451 260 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 CTAG1AP78358 180 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 SCRN3Q0VDG4 424 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 RNASE10Q5GAN6 216 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms