RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CBR4Q8N4T8 237 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR52E2Q8NGJ4 325 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 RNF138Q8WVD3 245 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 TAAR1Q96RJ0 339 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 SLC25A2Q9BXI2 301 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 CLN6Q9NWW5 311 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 PRG3Q9Y2Y8 225 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 KCNE3Q9Y6H6 103 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 MROH7Q68CQ1 1323 aa3.21□□□□□ -1.89
HMGB3P31-201ENST00000413333 TET2Q6N021 2002 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 TRBV6-6A0A0A6YYG2 114 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 IGLV1-36A0A0B4J1U3 117 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF99A8MXY4 864 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 C11orf94C9JXX5 98 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 H0Y9J4 135 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 FARS2O95363 451 aaKnown RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 TGM6O95932 706 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 RETP07949 1114 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 WARSP23381 471 aaKnown RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 NUP62P37198 522 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF136P52737 540 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF138P52744 262 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 RGNQ15493 299 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 MPPED2Q15777 294 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 CYB5R2Q6BCY4 276 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 PLET1Q6UQ28 207 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 MRPL21Q7Z2W9 205 aaKnown RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 FAM71AQ8IYT1 594 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 VKORC1L1Q8N0U8 176 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 TRAM1L1Q8N609 369 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 MDS2Q8NDY4 140 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 TMEM104Q8NE00 496 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 OR51F2Q8NH61 342 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 GIMAP1Q8WWP7 306 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 NAT6Q93015 286 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 ISOC2Q96AB3 205 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF317Q96PQ6 595 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 NAA50Q9GZZ1 169 aaKnown RBP3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 MCUBQ9NWR8 336 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 PSG8Q9UQ74 426 aa3.21□□□□□ -1.9
HMGB3P31-201ENST00000413333 MROH5Q6ZUA9 1318 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 A0A1W2PPV4 95 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 XRCC2O43543 280 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 CHMP2AO43633 222 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 CSTAP01040 98 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 CRYGCP07315 174 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 STAG3L2P0CL84 134 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 PMCHP20382 165 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF133P52736 654 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 HERVK_113P61574 105 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 LCN2P80188 198 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 CAPRIN1Q14444 709 aaKnown RBP3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 QPRTQ15274 297 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 TSC22D1Q15714 1073 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 RPEL1Q2QD12 228 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 C2orf83Q53S99 150 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 MLIPQ5VWP3 458 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 H3F3CQ6NXT2 135 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ULK3Q6PHR2 472 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ARL9Q6T311 187 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 NPSR1Q6W5P4 371 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 CBLN2Q8IUK8 224 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 MKXQ8IYA7 352 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 DUSP18Q8NEJ0 188 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZFP90Q8TF47 636 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 WFIKKN1Q96NZ8 548 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 EDA2RQ9HAV5 297 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ZNF331Q9NQX6 463 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 FAM49BQ9NUQ9 324 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 SLC39A1Q9NY26 324 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 IFNKQ9P0W0 207 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 NEURL4Q96JN8 1562 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 ARHGAP21Q5T5U3 1957 aa3.2□□□□□ -1.9
HMGB3P31-201ENST00000413333 MEGF6O75095 1541 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 IGHV3-64DA0A0J9YX35 117 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 SYCE1LA8MT33 242 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 TMX2-CTNND1H3BSU7 103 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 H7C1H1 209 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 GABRPO00591 440 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 NME4O00746 187 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 AQP8O94778 261 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 TDP2O95551 362 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 TCP1P17987 556 aaKnown RBP3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 ATF6P18850 670 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 CPN2P22792 545 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 OMGP23515 440 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 IL32P24001 234 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 GABRR2P28476 465 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 LONP1P36776 959 aaKnown RBP3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 CSNK1A1P48729 337 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 ATP6V0D1P61421 351 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 ART3Q13508 389 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 DGCR6Q14129 220 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 HSP90AA4PQ58FG1 418 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 METTL21CQ5VZV1 264 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 ABHD12BQ7Z5M8 362 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 HORMAD1Q86X24 394 aa3.19□□□□□ -1.9
HMGB3P31-201ENST00000413333 PRSS58Q8IYP2 241 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms