RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RIOK2Q9BVS4 552 aaKnown RBP4.72□□□□□ -1.65
HERC4-205ENST00000412272 CNTD2Q9H8S5 307 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 CUTCQ9NTM9 273 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 TAS2R5Q9NYW4 299 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 FRRS1LQ9P0K9 344 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 TUBD1Q9UJT1 453 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 HS3ST3A1Q9Y663 406 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 KPTNQ9Y664 436 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 SMIM35A0A1B0GVV1 85 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 GRAP2O75791 330 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 RAB36O95755 333 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 FCGR3AP08637 254 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 FGF5P12034 268 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 SNRPD1P62314 119 aaKnown RBP4.72□□□□□ -1.65
HERC4-205ENST00000412272 PAX2Q02962 417 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 ZNF763Q0D2J5 394 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 FZD5Q13467 585 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 HMGN3Q15651 99 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 LYPLAL1Q5VWZ2 237 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 CST9Q5W186 159 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 ZNF770Q6IQ21 691 aaPredicted RBP4.72□□□□□ -1.65
HERC4-205ENST00000412272 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
HERC4-205ENST00000412272 SLC27A1Q6PCB7 646 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 INO80CQ6PI98 192 aaPredicted RBP4.72□□□□□ -1.65
HERC4-205ENST00000412272 FIGLAQ6QHK4 219 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 ETFBKMTQ8IXQ9 262 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 GPR135Q8IZ08 494 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 ZBTB2Q8N680 514 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 OR9K2Q8NGE7 335 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 ADAMTS15Q8TE58 950 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 HARBI1Q96MB7 349 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 SLC6A18Q96N87 628 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 MS4A8Q9BY19 250 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 MFSD1Q9H3U5 465 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 CWH43Q9H720 699 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
HERC4-205ENST00000412272 TRBV2A0A0J9YWF9 115 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 HELTA6NFD8 242 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 M0R036 132 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 WIPF1O43516 503 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 B4GALT2O60909 372 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 CLDN11O75508 207 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 TNFSF15O95150 251 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 UBL3O95164 117 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 IFNA5P01569 189 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 TRGC2P03986 189 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 PSG1P11464 419 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 KDELR2P33947 212 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 AQP2P41181 271 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 SPIBQ01892 262 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 RNFT1Q5M7Z0 435 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 TMEM268Q5VZI3 342 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 SMARCD3Q6STE5 483 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 Q6ZPB1 254 aaPredicted RBP4.71□□□□□ -1.65
HERC4-205ENST00000412272 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.65
HERC4-205ENST00000412272 COMMD2Q86X83 199 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 OR4K2Q8NGD2 314 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 AUTS2Q8WXX7 1259 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 DNASE2BQ8WZ79 361 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 NINJ1Q92982 152 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 MCHR2Q969V1 340 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 TBL1YQ9BQ87 522 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 POLR2J2Q9GZM3 115 aaKnown RBP4.71□□□□□ -1.65
HERC4-205ENST00000412272 GPR35Q9HC97 309 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 CNIH4Q9P003 139 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 CGGBP1Q9UFW8 167 aaPredicted RBP4.71□□□□□ -1.65
HERC4-205ENST00000412272 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 PLXNA1Q9UIW2 1896 aa4.71□□□□□ -1.65
HERC4-205ENST00000412272 TDRD15B5MCY1 1934 aaKnown RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 FITM1A5D6W6 292 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 FIGNL2A6NMB9 653 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 GJE1A6NN92 205 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR11H12B2RN74 326 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 M0QXV9 152 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 RFXANKO14593 260 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 GLSO94925 669 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 TBX6O95947 436 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 MT-ND4P03905 459 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 WNT1P04628 370 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 CEACAM5P06731 702 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 F7P08709 466 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 SLC25A4P12235 298 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 PGAM2P15259 253 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 CDH12P55289 794 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 RAB38P57729 211 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 RANP62826 216 aaKnown RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 ASPHD2Q6ICH7 369 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 PGBD2Q6P3X8 592 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 DNM1P46Q6ZS02 220 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 C2orf73Q8N5S3 287 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR11H1Q8NG94 326 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR10G2Q8NGC3 310 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR10G3Q8NGC4 313 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR52L1Q8NGH7 329 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR11H2Q8NH07 326 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ZNF519Q8TB69 540 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 BRIX1Q8TDN6 353 aaKnown RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 HSH2DQ96JZ2 352 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 IL4I1Q96RQ9 567 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms