RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RHOUQ7L0Q8 258 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 SCMH1Q96GD3 660 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 SLITRK2Q9H156 845 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 B3GAT2Q9NPZ5 323 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 ABRACLQ9P1F3 81 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-206ENST00000409754 GDF2Q9UK05 429 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-206ENST00000409754 RALYQ9UKM9 306 aaKnown RBP12.47□□□□□ -0.41
LIMS2-206ENST00000409754 POLR1DQ9Y2S0 133 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 FLVCR1Q9Y5Y0 555 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 LHFPL6Q9Y693 200 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF716A6NP11 495 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 FAM166BA8MTA8 275 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 ITGB2P05107 769 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 OCMP0CE72 109 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 CDAP32320 146 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 MAGEA5P43359 124 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 MAGEB1P43366 347 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 SELENOPP49908 381 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 LHX2P50458 406 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 LSM6P62312 80 aaKnown RBP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 ARG2P78540 354 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 PHYHD1Q5SRE7 291 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 CNIH2Q6PI25 160 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 RDH10Q8IZV5 341 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 GDPD1Q8N9F7 314 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 ZFP62Q8NB50 900 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 OR2AJ1Q8NGZ0 328 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 TCF7L1Q9HCS4 588 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 CENPMQ9NSP4 180 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 SLC22A13Q9Y226 551 aa12.46□□□□□ -0.41
LIMS2-206ENST00000409754 AK6Q9Y3D8 172 aaKnown RBP12.46□□□□□ -0.41
LIMS2-206ENST00000409754 DHHO43323 396 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 CYTIPO60759 359 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 CELA3AP09093 270 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 ZNF708P17019 499 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 ATF1P18846 271 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 MSR1P21757 451 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-206ENST00000409754 SOX2P48431 317 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 MMP16P51512 607 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 ZNF766Q5HY98 468 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 SYT9Q86SS6 491 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-206ENST00000409754 TMEM178AQ8NBL3 297 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 FDCSPQ8NFU4 85 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 OR10S1Q8NGN2 331 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 OR10AC1Q8NH08 325 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 ROBO4Q8WZ75 1007 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 ACKR4Q9NPB9 350 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 OR52A1Q9UKL2 312 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 GTF2A1LQ9UNN4 478 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 CACNA1CQ13936 2221 aa12.45□□□□□ -0.42
LIMS2-206ENST00000409754 TMEM269A0A1B0GVZ9 245 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 FAM25AB3EWG3 89 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 FAM25CB3EWG5 89 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 FAM25GB3EWG6 89 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SLC43A1O75387 559 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ISG15P05161 165 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SLC2A2P11168 524 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 NPR2P20594 1047 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 CLDN18P56856 261 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 DEFA1P59665 94 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 DEFA3P59666 94 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 PPIAP62937 165 aaKnown RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 RIN1Q13671 783 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 BCL2A1Q16548 175 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ODF4Q2M2E3 257 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 KLHL24Q6TFL4 600 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ZNF704Q6ZNC4 412 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 CFAP77Q6ZQR2 320 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 FCRLAQ7L513 359 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SLC22A16Q86VW1 577 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 OR8H2Q8N162 312 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 FAM109AQ8N4B1 249 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 MEIOBQ8N635 442 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 OR51A4Q8NGJ6 313 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 TRMT10AQ8TBZ6 339 aaKnown RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ORAI1Q96D31 301 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 GFI1Q99684 422 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
LIMS2-206ENST00000409754 ULBP2Q9BZM5 246 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SLC25A18Q9H1K4 315 aa12.44□□□□□ -0.42
LIMS2-206ENST00000409754 SLC6A15Q9H2J7 730 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms