RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CCNA1P78396 465 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 TCEAL5Q5H9L2 206 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 NIPA1Q7RTP0 329 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 B3GNT7Q8NFL0 401 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 OR2L3Q8NG85 312 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 TCEAL3Q969E4 200 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 CCDC126Q96EE4 140 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 MICU1Q9BPX6 476 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 BLOC1S6Q9UL45 172 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 TMEM120BA0PK00 339 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 PCNX2A6NKB5 2137 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 BTNL10A8MVZ5 291 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 NUPL2O15504 423 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 EIF4EP06730 217 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 P0C880 135 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 PABPC4LP0CB38 370 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 MX1P20591 662 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 HNRNPH3P31942 346 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 PLP1P60201 277 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 PPP1CBP62140 327 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 RBX1P62877 108 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 PRKCDQ05655 676 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 FUT5Q11128 374 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 QPRTQ15274 297 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 RNASE13Q5GAN3 156 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 APCDD1LQ8NCL9 501 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 OR2A1Q8NGT9 310 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 TRIM44Q96DX7 344 aaPredicted RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 RSG1Q9BU20 258 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 FGF20Q9NP95 211 aaPredicted RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 C8orf17Q9NRJ1 99 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 IGLV1-36A0A0B4J1U3 117 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 SURF6O75683 361 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 IGLV3-25P01717 112 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 CRYGBP07316 175 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 CD37P11049 281 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 GGT1P19440 569 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 PRPHP41219 470 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 HNMTP50135 292 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 RPS11P62280 158 aaKnown RBP eCLIP1.8□□□□□ -2.12
PMS1-203ENST00000409593 CHIT1Q13231 466 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 TAF7Q15545 349 aaPredicted RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 CASP12Q6UXS9 341 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 COX18Q8N8Q8 333 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 TVP23CQ96ET8 276 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 CDX2Q99626 313 aaPredicted RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 ATP5SQ99766 215 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 DHX35Q9H5Z1 703 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 EXOSC4Q9NPD3 245 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 SAMSN1Q9NSI8 373 aaKnown RBP1.8□□□□□ -2.12
PMS1-203ENST00000409593 VANGL2Q9ULK5 521 aa1.8□□□□□ -2.12
PMS1-203ENST00000409593 KANK1Q14678 1352 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 AHDC1Q5TGY3 1603 aaPredicted RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 LRRIQ3A6PVS8 624 aaPredicted RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 NVLO15381 856 aaKnown RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 H6PDO95479 791 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 LOXP28300 417 aaPredicted RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 GPX4P36969 197 aaPredicted RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 ADARB1P78563 741 aaKnown RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 BST2Q10589 180 aaKnown RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 OR7A5Q15622 319 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 RUFY3Q7L099 469 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 SPATA4Q8NEY3 305 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 OR10AD1Q8NGE0 317 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 GPR151Q8TDV0 419 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 DCPSQ96C86 337 aaKnown RBP1.79□□□□□ -2.12
PMS1-203ENST00000409593 RBBP8Q99708 897 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 ANGPTL4Q9BY76 406 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 C21orf62Q9NYP8 219 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 MMACHCQ9Y4U1 282 aa1.79□□□□□ -2.12
PMS1-203ENST00000409593 SERPINA5P05154 406 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 ACSM4P0C7M7 580 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 ERGP11308 486 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 CHMLP26374 656 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 NSG1P42857 185 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 SYNJ2BPP57105 145 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 TGM3Q08188 693 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 VPS26BQ4G0F5 336 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 GPR107Q5VW38 600 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 NBPF5PQ86XG9 351 aaPredicted RBP1.78□□□□□ -2.12
PMS1-203ENST00000409593 NKAIN4Q8IVV8 208 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 TEX9Q8N6V9 391 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 EIF1ADQ8N9N8 165 aaKnown RBP1.78□□□□□ -2.12
PMS1-203ENST00000409593 ZNF680Q8NEM1 530 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 SHANK2-AS3Q9BTD1 123 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 LRRC40Q9H9A6 602 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 TMEM9BQ9NQ34 198 aa1.78□□□□□ -2.12
PMS1-203ENST00000409593 PSMC3IPQ9P2W1 217 aaPredicted RBP1.78□□□□□ -2.12
PMS1-203ENST00000409593 FAM240BA0A1B0GVZ2 78 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 GABRR3A8MPY1 467 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 CYB5R3P00387 301 aaPredicted RBP1.77□□□□□ -2.13
PMS1-203ENST00000409593 CTSLP07711 333 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 ADNP2Q6IQ32 1131 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 FBXL13Q8NEE6 735 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 TUBGCP3Q96CW5 907 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 RHOXF2Q9BQY4 288 aa1.77□□□□□ -2.13
PMS1-203ENST00000409593 GGTLC1Q9BX51 225 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms