RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TMEM203Q969S6 136 aa11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 CPNE4Q96A23 557 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 KATNB1Q9BVA0 655 aa11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 SRRQ9GZT4 340 aa11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 C20orf141Q9NUB4 165 aa11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 PLCE1Q9P212 2302 aa11.12□□□□□ -0.63
CHRNA1-205ENST00000409542 CCDC182A6NF36 153 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 RGS5O15539 181 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 LY6HO94772 140 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 LALBAP00709 142 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 CLEC2LP0C7M8 214 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 SPNP16150 400 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 PAICSP22234 425 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 ATP6V1E1P36543 226 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 ACAA2P42765 397 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 CAPZA2P47755 286 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 RNPS1Q15287 305 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 DDI2Q5TDH0 399 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 AGAP6Q5VW22 663 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 CYB5R2Q6BCY4 276 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 CBLN3Q6UW01 205 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 Q6ZT83 130 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 LAX1Q8IWV1 398 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 OR13C2Q8NGS9 318 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 DNAJA4Q8WW22 397 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 SHARPINQ9H0F6 387 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 MEPEQ9NQ76 525 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC35A3Q9Y2D2 325 aa11.11□□□□□ -0.63
CHRNA1-205ENST00000409542 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 RIIAD1A6NNX1 92 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 PRR23D1E9PI22 279 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 LMX1BO60663 402 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 PRR23D2P0DMB1 279 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 IMPDH2P12268 514 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 CFL1P23528 166 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC6A6P31641 620 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 OR3A2P47893 321 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 ATP12AP54707 1039 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 PPP3R1P63098 170 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 ZNF117Q03924 483 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 MXD1Q05195 221 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 CBX3Q13185 183 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 ZNF79Q15937 498 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 NDUFAF6Q330K2 333 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 OR8H2Q8N162 312 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 GDPD1Q8N9F7 314 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 C10orf105Q8TEF2 133 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 ADAD1Q96M93 576 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 IFT27Q9BW83 186 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 ABCB9Q9NP78 766 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 HAO2Q9NYQ3 351 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 IL20RAQ9UHF4 553 aa11.1□□□□□ -0.63
CHRNA1-205ENST00000409542 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 A0A1W2PR80 420 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 FAM183AA6NL82 134 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 C12orf71A8MTZ7 269 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 GABRPO00591 440 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 WIPF1O43516 503 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 RGS9O75916 674 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 IFNGP01579 166 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 SAGP10523 405 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC25A16P16260 332 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 FUT1P19526 365 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC2A5P22732 501 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 DSCR9P59020 149 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 GALEQ14376 348 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 TMEM99Q8N816 258 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 SLC37A3Q8NCC5 494 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 FAM168AQ92567 244 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 DHRS9Q9BPW9 319 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 TPK1Q9H3S4 243 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 BCO1Q9HAY6 547 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 TIGARQ9NQ88 270 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 UBQLN4Q9NRR5 601 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 BABAM2Q9NXR7 383 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
CHRNA1-205ENST00000409542 A0A1W2PQD3 144 aa11.08□□□□□ -0.64
CHRNA1-205ENST00000409542 HTR3EA5X5Y0 456 aa11.08□□□□□ -0.64
CHRNA1-205ENST00000409542 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-205ENST00000409542 RNF13O43567 381 aa11.08□□□□□ -0.64
CHRNA1-205ENST00000409542 IL7P13232 177 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms