RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GABREP78334 506 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 WIPI1Q5MNZ9 446 aaPredicted RBP18.36■□□□□ 0.53
USP39-203ENST00000409470 TOMM5Q8N4H5 51 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 ADAMTS17Q8TE56 1095 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 ZFP64Q9NPA5 681 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 TAS2R4Q9NYW5 299 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 BOKQ9UMX3 212 aaPredicted RBP18.36■□□□□ 0.53
USP39-203ENST00000409470 CACNA1HO95180 2353 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 PINLYPA6NC86 204 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 ZNF878C9JN71 531 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 CTDSPLO15194 276 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 FAM157BP0CG42 384 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 DCTDP32321 178 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 RAC3P60763 192 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 CSRP2Q16527 193 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 IL22RA1Q8N6P7 574 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 UTP23Q9BRU9 249 aaKnown RBP18.35■□□□□ 0.53
USP39-203ENST00000409470 PCNX2A6NKB5 2137 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 CNTRLQ7Z7A1 2325 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 DNPH1O43598 174 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 CARD18P57730 90 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 KCNMB1Q16558 191 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 SGCAQ16586 387 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 SLC36A2Q495M3 483 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 TMEM69Q5SWH9 247 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 ASPHD2Q6ICH7 369 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 LUZP2Q86TE4 346 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 TMEM54Q969K7 222 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 FAM117AQ9C073 453 aa18.35■□□□□ 0.53
USP39-203ENST00000409470 CENPXA8MT69 81 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 SMAD9O15198 467 aaKnown RBP18.34■□□□□ 0.53
USP39-203ENST00000409470 GSTZ1O43708 216 aaPredicted RBP18.34■□□□□ 0.53
USP39-203ENST00000409470 SCAND1P57086 179 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 RAB11BQ15907 218 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 MTFR2Q6P444 385 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 GGNQ86UU5 652 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 PLPP7Q8NBV4 271 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 SMIM4Q8WVI0 70 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 PNPLA2Q96AD5 504 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 HAVCR1Q96D42 359 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 PBOV1Q9GZY1 135 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 PARD6AQ9NPB6 346 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 CDV3Q9UKY7 258 aaKnown RBP18.34■□□□□ 0.53
USP39-203ENST00000409470 MRPS18CQ9Y3D5 142 aaKnown RBP18.34■□□□□ 0.53
USP39-203ENST00000409470 NCKAP5O14513 1909 aa18.34■□□□□ 0.53
USP39-203ENST00000409470 FSTP19883 344 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 POU3F2P20265 443 aaPredicted RBP18.33■□□□□ 0.53
USP39-203ENST00000409470 STARP49675 285 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 AIMP2Q13155 320 aaKnown RBP18.33■□□□□ 0.53
USP39-203ENST00000409470 PHYHD1Q5SRE7 291 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 GLT8D1Q68CQ7 371 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 PIP4P1Q86T03 277 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 OR51D1Q8NGF3 324 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 UBASH3BQ8TF42 649 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 IP6K3Q96PC2 410 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 SIGLEC12Q96PQ1 595 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 AUNIPQ9H7T9 357 aa18.33■□□□□ 0.53
USP39-203ENST00000409470 TTLL8A6PVC2 850 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 RER1O15258 196 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 NEURL1O76050 574 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 TTRP02766 147 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 ITGA5P08648 1049 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 ACSM4P0C7M7 580 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 IGFBP3P17936 291 aaPredicted RBP18.33■□□□□ 0.52
USP39-203ENST00000409470 CDK2P24941 298 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 SELENOPP49908 381 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 SIAH3Q8IW03 269 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 ELMOD2Q8IZ81 293 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 TMEM123Q8N131 208 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 DEFB124Q8NES8 71 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 UPRTQ96BW1 309 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 FAM173AQ9BQD7 235 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 SF3B5Q9BWJ5 86 aaKnown RBP18.33■□□□□ 0.52
USP39-203ENST00000409470 OR2B2Q9GZK3 357 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 NIPAL2Q9H841 368 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 N6AMT1Q9Y5N5 214 aa18.33■□□□□ 0.52
USP39-203ENST00000409470 FREM2Q5SZK8 3169 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 SLC17A2O00624 439 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 CXCL13O43927 109 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 CFPP27918 469 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 SLC6A1P30531 599 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 PRKXP51817 358 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 PSMA6P60900 246 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 FOXO1Q12778 655 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 C10orf128Q5T292 105 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 LINC00696Q6ZRV3 163 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 RHOUQ7L0Q8 258 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 GLRX5Q86SX6 157 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 ZIC4Q8N9L1 334 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 OR2V1Q8NHB1 315 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 NKD1Q969G9 470 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 ZNF775Q96BV0 537 aaPredicted RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 PHF3Q92576 2039 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 A0A0B4J293 547 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 SYT7O43581 403 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 ORC5O43913 435 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 LMX1BO60663 402 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 CSRP1P21291 193 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 MSR1P21757 451 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 DDOSTP39656 456 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms