RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 GALR2O43603 387 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 DOK2O60496 412 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CST4P01036 141 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 NRASP01111 189 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR10J4P0C629 311 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 GABRB1P18505 474 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FUT6P51993 359 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ZXDBP98169 803 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ZNF90Q03938 601 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CLPPQ16740 277 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TMEM128Q5BJH2 165 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 PRAMEF5Q5TYX0 476 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 PRAMEF6Q5VXH4 476 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 C18orf63Q68DL7 685 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 PRICKLE2Q7Z3G6 844 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FJX1Q86VR8 437 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 MFSD4AQ8N468 514 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 DTX3Q8N9I9 347 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TEX19Q8NA77 164 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SLC24A4Q8NFF2 622 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR5B3Q8NH48 314 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SFT2D1Q8WV19 159 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SARAFQ96BY9 339 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FAM122AQ96E09 287 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 DDOQ99489 341 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FKBP11Q9NYL4 201 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SLCO1B1Q9Y6L6 691 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 LOC107986453A0A1B0GWG9 222 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FRG2CA6NGY1 282 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 HMSDA8MTL9 139 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 H3BQ06 376 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FRS3O43559 492 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 MBPP02686 304 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 BCL6P41182 706 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CNN1P51911 297 aaKnown RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ADPRHP54922 357 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 LIM2P55344 173 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR2B8PP59922 312 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 HSF1Q00613 529 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TLE1Q04724 770 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ZP2Q05996 745 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SHBQ15464 509 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FCRLBQ6BAA4 426 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 LINC00346Q8IVM7 164 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR5M11Q96RB7 305 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 MMP26Q9NRE1 261 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 DECR2Q9NUI1 292 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 C5AR2Q9P296 337 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FLVCR1Q9Y5Y0 555 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 N4BP2Q86UW6 1770 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 P2RY10O00398 339 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SLC17A2O00624 439 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 B4GAT1O43505 415 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CEBPBP17676 345 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 FCGR2CP31995 323 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 GJA4P35212 333 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CYB561P49447 251 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 JAG1P78504 1218 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 DCXRQ7Z4W1 244 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CADM3Q8N126 398 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ZADH2Q8N4Q0 377 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TCTEX1D1Q8N7M0 179 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR51S1Q8NGJ8 323 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CXXC1Q9P0U4 656 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 GAB2Q9UQC2 676 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CSAG2Q9Y5P2 127 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 OR52A4PA6NMU1 304 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 G3V3Q6 166 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 M0R143 59 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 CTDSPLO15194 276 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SIGLEC6O43699 453 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ADAM11O75078 769 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 G0S2P27469 103 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 RAD52P43351 418 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 GAB1Q13480 694 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SMN1Q16637 294 aaKnown RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 LIPNQ5VXI9 398 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ELSPBP1Q96BH3 223 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 MRPS24Q96EL2 167 aaKnown RBP5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ZIC5Q96T25 663 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 SDF2Q99470 211 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 ARHGDIGQ99819 225 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 NIT2Q9NQR4 276 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 KCMF1Q9P0J7 381 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 PHLPP1O60346 1717 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 MYH7BA7E2Y1 1941 aa5.57□□□□□ -1.52
SCN1A-203ENST00000409050 TCRBV5S2A0A599 114 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 FAM166BA8MTA8 275 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 M0QZ24 198 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 F13BP05160 661 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 DEFB110Q30KQ9 67 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 C2orf76Q3KRA6 126 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 MARCH8Q5T0T0 291 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 NCR3LG1Q68D85 454 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 ZNF787Q6DD87 383 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 OR2A2Q6IF42 318 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 CCDC190Q86UF4 302 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 PRR18Q8N4B5 295 aa5.56□□□□□ -1.52
SCN1A-203ENST00000409050 OR13D1Q8NGV5 346 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms