RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 BAG5Q9UL15 447 aa10.32□□□□□ -0.76
APOBEC3B-204ENST00000407298 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
APOBEC3B-204ENST00000407298 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 NPIPB13A6NJU9 1138 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 SRRM5B3KS81 715 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 NPIPB4C9JG80 1138 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 HOXA3O43365 443 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 NDUFA7O95182 113 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 OR5F1O95221 314 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 PLATP00750 562 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 NGFP01138 241 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 CST2P09228 141 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 WNT2P09544 360 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 IGHV4-38-2P0DP08 117 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 CDAP32320 146 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 RPL15P61313 204 aaKnown RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 SEC61A1P61619 476 aaKnown RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 GNB2P62879 340 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 ERVK-25P63136 954 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 CD47Q08722 323 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 PSG7Q13046 419 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 SLC27A4Q6P1M0 643 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 RFPL4BQ6ZWI9 263 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 TSEN54Q7Z6J9 526 aaKnown RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 TMEM86BQ8N661 226 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 RAB40AQ8WXH6 277 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 COG8Q96MW5 612 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 RBP7Q96R05 134 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 CITED1Q99966 193 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 HOPXQ9BPY8 73 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 WACQ9BTA9 647 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 OR2H1Q9GZK4 316 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 PRDM13Q9H4Q3 707 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 C20orf141Q9NUB4 165 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 KIF17Q9P2E2 1029 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 NDRG4Q9ULP0 352 aaKnown RBP10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 A4GNTQ9UNA3 340 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 SNX13Q9Y5W8 968 aa10.31□□□□□ -0.76
APOBEC3B-204ENST00000407298 IGHV2-70DA0A0C4DH43 119 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 CLPSL1A2RUU4 121 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 TMEM178BH3BS89 294 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 CXCR6O00574 342 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 FFAR1O14842 300 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 PIP5K1CO60331 668 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 ABHD16AO95870 558 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 IGF2P01344 180 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 F13BP05160 661 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 FUT1P19526 365 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 KITLGP21583 273 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 PRDX6P30041 224 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 TAS2R41P59536 307 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 PSME3P61289 254 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 GNGT1P63211 74 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 SELENOWP63302 87 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 RPL18Q07020 188 aaKnown RBP10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 SPRNQ5BIV9 151 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 TMEM255AQ5JRV8 349 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 NLRC3Q7RTR2 1065 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 PIGWQ7Z7B1 504 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 NSMAFQ92636 917 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 NABP1Q96AH0 204 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 TPD52L3Q96J77 140 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 FAM71F1Q96KD3 344 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 PKP2Q99959 881 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 ALG12Q9BV10 488 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 POLR2J2Q9GZM3 115 aaKnown RBP10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 NSRP1Q9H0G5 558 aaKnown RBP10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 POLR2J3Q9H1A7 115 aaKnown RBP10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 WNT5BQ9H1J7 359 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 EFCAB1Q9HAE3 211 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 TBCCD1Q9NVR7 557 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 DCAF16Q9NXF7 216 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 RIMS3Q9UJD0 308 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 AP3M1Q9Y2T2 418 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 UGT2A1Q9Y4X1 527 aa10.3□□□□□ -0.76
APOBEC3B-204ENST00000407298 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 TRAV40A0A0B4J280 105 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 KIR2DS1A0A191URI9 304 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 C12orf71A8MTZ7 269 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 J3KTA2 159 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 OR7A10O76100 309 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 SLC2A10O95528 541 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 IFNA14P01570 189 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 MT-ND1P03886 318 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 TSPAN19P0C672 248 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 COX5BP10606 129 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 RPS2P15880 293 aaKnown RBP10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 NCK1P16333 377 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 PAX2Q02962 417 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 HLXQ14774 488 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 ARMC4Q5T2S8 1044 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 GPR157Q5UAW9 335 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 SLC25A47Q6Q0C1 308 aa10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 FIP1L1Q6UN15 594 aaKnown RBP10.29□□□□□ -0.76
APOBEC3B-204ENST00000407298 CBLL1Q75N03 491 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms