RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 RAB35Q15286 201 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 PABPC1L2AQ5JQF8 200 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 RNLSQ5VYX0 342 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 AHSA2Q719I0 299 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 ACBD4Q8NC06 268 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 OR10H4Q8NGA5 316 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 AKR7LQ8NHP1 331 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 RNF133Q8WVZ7 376 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 MRPL48Q96GC5 212 aaKnown RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 COQ7Q99807 217 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF649Q9BS31 505 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 MED18Q9BUE0 208 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 NOX3Q9HBY0 568 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 PNRC2Q9NPJ4 139 aaKnown RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 EXOSC1Q9Y3B2 195 aaKnown RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 C19orf84I3L1E1 186 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 DOK2O60496 412 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF254O75437 659 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 EPXP11678 715 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 IGFBP2P18065 325 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 CHN2P52757 468 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 GABARAPL2P60520 117 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ROM1Q03395 351 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF85Q03923 595 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 GALEQ14376 348 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 TMEM154Q6P9G4 183 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 VASH1Q7L8A9 365 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 LHFPL3Q86UP9 236 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 DMRTC2Q8IXT2 367 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF679Q8IYX0 411 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 CPEB3Q8NE35 698 aaKnown RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 OR10S1Q8NGN2 331 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 OR1J2Q8NGS2 313 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 AMELYQ99218 206 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 TBX5Q99593 518 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ATF6BQ99941 703 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 C1QTNF6Q9BXI9 259 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 MROQ9BYG7 248 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 DDX28Q9NUL7 540 aaKnown RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 PAK1IP1Q9NWT1 392 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
LINC00339-201ENST00000404210 ERVK13-1Q9NX77 482 aa10.71□□□□□ -0.69
LINC00339-201ENST00000404210 TRIM64A6NGJ6 449 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 CASKO14936 926 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 RGS10O43665 173 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SULT1C4O75897 302 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 H2BFMP0C1H6 154 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 LIMS3P0CW19 117 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 LIMS4P0CW20 117 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 MYL12AP19105 171 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 CRYGSP22914 178 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 PTAFRP25105 342 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 STOMP27105 288 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 C21orf33P30042 268 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 DCTDP32321 178 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 APLNRP35414 380 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 OPRL1P41146 370 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 KIR2DL3P43628 341 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 GRB2P62993 217 aaKnown RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 MVKQ03426 396 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SNTB1Q13884 538 aaKnown RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 TAF13Q15543 124 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 KCTD21Q4G0X4 260 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SEZ6L2Q6UXD5 910 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SSX6Q7RTT6 188 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 KRT77Q7Z794 578 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SNX33Q8WV41 574 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 ZC3HAV1LQ96H79 300 aaKnown RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 POM121L2Q96KW2 1035 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SIGLEC11Q96RL6 698 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 SPOCK3Q9BQ16 436 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 CDCA4Q9BXL8 241 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 NIPAL2Q9H841 368 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms