RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 M0R129 80 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 TLX2O43763 284 aaPredicted RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 WBP4O75554 376 aaKnown RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 CST2P09228 141 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MMP7P09237 267 aaPredicted RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 OR8G3PP0DMU2 310 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MSR1P21757 451 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 CRYGSP22914 178 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MYF6P23409 242 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 CDAP32320 146 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 HIST1H3AP68431 136 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MAD2L1BPQ15013 274 aaPredicted RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 TBRG1Q3YBR2 411 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 HIST2H3PS2Q5TEC6 136 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MALRD1Q5VYJ5 2156 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 LAIR2Q6ISS4 152 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 HIST2H3AQ71DI3 136 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MEPCEQ7L2J0 689 aaKnown RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 GID4Q8IVV7 300 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 TIGD4Q8IY51 512 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 SETD9Q8NE22 299 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 BBS1Q8NFJ9 593 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 OR9Q1Q8NGQ5 310 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 UBASH3BQ8TF42 649 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 HSD17B8Q92506 261 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 S100PBPQ96BU1 408 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 PLPPR2Q96GM1 343 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 PLEKHA8Q96JA3 519 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 IL4I1Q96RQ9 567 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 TEAD3Q99594 435 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 ZNF184Q99676 751 aaPredicted RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 CCL19Q99731 98 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 APOL4Q9BPW4 351 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 ACTR6Q9GZN1 396 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MED20Q9H944 212 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MOV10Q9HCE1 1003 aaKnown RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 DLL4Q9NR61 685 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 MRPS18AQ9NVS2 196 aaKnown RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 IMPAD1Q9NX62 359 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 WARS2Q9UGM6 360 aaKnown RBP7.99□□□□□ -1.13
VPS53-203ENST00000401468 CYB5R1Q9UHQ9 305 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 AMDHD2Q9Y303 409 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 ATRQ13535 2644 aa7.99□□□□□ -1.13
VPS53-203ENST00000401468 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 SLC22A31A6NKX4 558 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 J3QRE1 110 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 DENRO43583 198 aaKnown RBP7.98□□□□□ -1.13
VPS53-203ENST00000401468 RAD51DO75771 328 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 CLIC3O95833 236 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 IGKV3-15P01624 115 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 IGLV1-44P01699 117 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 GYPBP06028 91 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 B4GALT1P15291 398 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 HTR1FP30939 366 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 SLC15A1P46059 708 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
VPS53-203ENST00000401468 AQP6Q13520 282 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 TAB1Q15750 504 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 HIKESHIQ53FT3 197 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 C6orf52Q5T4I8 152 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 C9orf135Q5VTT2 229 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 KLHL24Q6TFL4 600 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 ZNF813Q6ZN06 617 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 SKA3Q8IX90 412 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 PROKR2Q8NFJ6 384 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 CYGBQ8WWM9 190 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 C11orf40Q8WZ69 217 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 HTRA1Q92743 480 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 ZNF582Q96NG8 517 aaPredicted RBP7.98□□□□□ -1.13
VPS53-203ENST00000401468 ZNF416Q9BWM5 594 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 ATPIF1Q9UII2 106 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 LHFPL6Q9Y693 200 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 COMMD3-BMI1R4GMX3 469 aa7.98□□□□□ -1.13
VPS53-203ENST00000401468 CIB4A0PJX0 185 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 SMPD2O60906 423 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ENTPD6O75354 484 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 SEC14L2O76054 403 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 UBL3O95164 117 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 GOSR1O95249 250 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 MPZL1O95297 269 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 FARS2O95363 451 aaKnown RBP7.97□□□□□ -1.13
VPS53-203ENST00000401468 GPANK1O95872 356 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 PSKH1P11801 424 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ZNF14P17017 642 aaPredicted RBP7.97□□□□□ -1.13
VPS53-203ENST00000401468 IL32P24001 234 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 PCSK6P29122 969 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 GSTT1P30711 240 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 HOXC12P31275 282 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 FMO3P31513 532 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 PYCR1P32322 319 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 CXCR4P61073 352 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 PCBD1P61457 104 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 APOFQ13790 326 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 KRTAP27-1Q3LI81 207 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 SLC18B1Q6NT16 456 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ADAM5Q6NVV9 412 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 UGT2A3Q6UWM9 527 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ZNF704Q6ZNC4 412 aaPredicted RBP7.97□□□□□ -1.13
VPS53-203ENST00000401468 RHOUQ7L0Q8 258 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 BCDIN3DQ7Z5W3 292 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms