RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 GPN1Q9HCN4 374 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FAM206AQ9NX38 181 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 KLK11Q9UBX7 282 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF878C9JN71 531 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ERCC1P07992 297 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SULT1A3P0DMM9 295 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SULT1A4P0DMN0 295 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LIFP15018 202 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 HSD11B1P28845 292 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PRSS3P35030 304 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CCR6P51684 374 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF133P52736 654 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ACTBP60709 375 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LSM6P62312 80 aaKnown RBP15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ACTG1P63261 375 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FCN2Q15485 313 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ODF4Q2M2E3 257 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMEM53Q6P2H8 277 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMEM156Q8N614 296 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 UQCC2Q9BRT2 126 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 BEX2Q9BXY8 128 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 STRADBQ9C0K7 418 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CENPMQ9NSP4 180 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PADI1Q9ULC6 663 aa15.77■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CIB4A0PJX0 185 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SNRPGP15A8MWD9 76 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CPN1P15169 458 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CHAF1BQ13112 559 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 EIF3IQ13347 325 aaKnown RBP15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CREB3L2Q70SY1 520 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 FAM109AQ8N4B1 249 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 OR5D14Q8NGL3 314 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 OR2I1PQ8NGU4 316 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 LOXL4Q96JB6 756 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 RADILQ96JH8 1075 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 HRH3Q9Y5N1 445 aa15.77■□□□□ 0.11
HLA-DQB1-204ENST00000399084 MEIKINA0A087WXM9 373 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 IGKV1D-43A0A0B4J1Z2 117 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 NDUFB6O95139 128 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CTSSP25774 331 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PSMA6P60900 246 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 FAM189A2Q15884 450 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 RNASE12Q5GAN4 147 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ASPHD2Q6ICH7 369 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SLC25A25Q6KCM7 469 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ADGRE4PQ86SQ3 457 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GIMAP1Q8WWP7 306 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 NUDT16L1Q9BRJ7 211 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 EMC6Q9BV81 110 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CDCP1Q9H5V8 836 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 NOX3Q9HBY0 568 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 TMEM138Q9NPI0 162 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 HPF1Q9NWY4 346 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 TAS2R4Q9NYW5 299 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 NPTNQ9Y639 398 aa15.76■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ALPK2Q86TB3 2170 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PRUNE2Q8WUY3 3088 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 FREM3P0C091 2139 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SHISA8B8ZZ34 492 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 H0YC42 278 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 AGRPO00253 132 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 LDLRAD4O15165 306 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ICMTO60725 284 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GSK3AP49840 483 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GRB2P62993 217 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 RAC1P63000 192 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GABREP78334 506 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SSPNQ14714 243 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GLYATL3Q5SZD4 288 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ZNF782Q6ZMW2 699 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 MDGA2Q7Z553 956 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 LYPD6Q86Y78 171 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 LINC00346Q8IVM7 164 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 DTWD2Q8NBA8 298 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 CCDC54Q8NEL0 328 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PNPLA2Q96AD5 504 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PIGQQ9BRB3 760 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PBOV1Q9GZY1 135 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 FBLN5Q9UBX5 448 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GDF2Q9UK05 429 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 RAB22AQ9UL26 194 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 MRPS18CQ9Y3D5 142 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 PCDHGA5Q9Y5G8 931 aa15.75■□□□□ 0.11
HLA-DQB1-204ENST00000399084 TMEM272A0A1B0GTI8 110 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 A0A1W2PNR3 127 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SYT7O43581 403 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GMDSO60547 372 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 TTRP02766 147 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 MELTFP08582 738 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ACSM4P0C7M7 580 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 BDKRB2P30411 391 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 RBMS2Q15434 407 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 C10orf128Q5T292 105 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 STPG1Q5TH74 334 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SFRP4Q6FHJ7 346 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 GPAT4Q86UL3 456 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 SPICQ8N5J4 248 aa15.74■□□□□ 0.11
HLA-DQB1-204ENST00000399084 ZBTB44Q8NCP5 570 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms