RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 OXTP01178 125 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 HBE1P02100 147 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 HLA-DPB1P04440 258 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 ARG1P05089 322 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 BCHEP06276 602 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 CTSLP07711 333 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 IGHV1-8P0DP01 117 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 ZNF823P16415 610 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 IGFBP3P17936 291 aaPredicted RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 RAB4AP20338 218 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 HMOX2P30519 316 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 CEACAM6P40199 344 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 CSNK1A1P48729 337 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 PPOXP50336 477 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 EIF3EP60228 445 aaKnown RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 ARG2P78540 354 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 IRF8Q02556 426 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 RAD51Q06609 339 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 ERCC8Q13216 396 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 RGNQ15493 299 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 KLHL40Q2TBA0 621 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 DEFB116Q30KQ4 102 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 AVPI1Q5T686 147 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 Q5W150 140 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 CEMP1Q6PRD7 247 aaPredicted RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 MBOAT1Q6ZNC8 495 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 MBOAT2Q6ZWT7 520 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 OTUD6AQ7L8S5 288 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 TMEM230Q96A57 120 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 JSRP1Q96MG2 331 aaPredicted RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 TEKT3Q9BXF9 490 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 TMEM38AQ9H6F2 299 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 PTTG3PQ9NZH4 202 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 PDP1Q9P0J1 537 aaPredicted RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 OR12D3Q9UGF7 316 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 KLK12Q9UKR0 248 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 RCL1Q9Y2P8 373 aaKnown RBP1.67□□□□□ -2.14
CD47-203ENST00000398258 CAMTA1Q9Y6Y1 1673 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 PIKFYVEQ9Y2I7 2098 aa1.67□□□□□ -2.14
CD47-203ENST00000398258 MROH7-TTC4A0A0A0MT08 1334 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 IGLV3-16A0A075B6K0 115 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 A0A1B0GW55 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 A0A1W2PRD5 423 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 TSPAN11A1L157 253 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ANKRD63C9JTQ0 380 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 M0R3G1 203 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 BCKDKO14874 412 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ZBTB5O15062 677 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ZNF207O43670 478 aaKnown RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 LSM8O95777 96 aaKnown RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 FABP3P05413 133 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 CLTAP09496 248 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4L2P0CJ85 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4L3P0CJ86 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4L5P0CJ88 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4L6P0CJ89 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4L7P0CJ90 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 STAG3L3P0CL85 134 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 PRPS2P11908 318 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ZNF32P17041 273 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 TCN2P20062 427 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 CEACAM3P40198 252 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 NBL1P41271 181 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 MAGEA1P43355 309 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 SLC11A1P49279 550 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ZNF121P58317 390 aaPredicted RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 ESRRGP62508 458 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 LOXL1Q08397 574 aaPredicted RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 GINS1Q14691 196 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 KIR2DS1Q14954 304 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 IRF4Q15306 451 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 PSMD5Q16401 504 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ZSCAN26Q16670 478 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 FAM83EQ2M2I3 478 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 PTPN20Q4JDL3 420 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 PIP5KL1Q5T9C9 394 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 OR52W1Q6IF63 320 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 Q6ZR03 302 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 FAM122BQ7Z309 247 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 TMCO2Q7Z6W1 182 aaPredicted RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 BBOF1Q8ND07 529 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 OR10AD1Q8NGE0 317 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 OR52E2Q8NGJ4 325 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 GPX8Q8TED1 209 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 NTAN1Q96AB6 310 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ISG20Q96AZ6 181 aaKnown RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 BMFQ96LC9 184 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 C9orf72Q96LT7 481 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 NAP1L5Q96NT1 182 aaPredicted RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 MICU1Q9BPX6 476 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 IQCGQ9H095 443 aaKnown RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 TDRD3Q9H7E2 651 aaKnown RBP1.66□□□□□ -2.14
CD47-203ENST00000398258 SYNDIG1Q9H7V2 258 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 RETNQ9HD89 108 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ACP6Q9NPH0 428 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 FAM49BQ9NUQ9 324 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 UVRAGQ9P2Y5 699 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 DUX4Q9UBX2 424 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 ARID1AO14497 2285 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms