RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 COQ7Q99807 217 aa12.27□□□□□ -0.45
HDDC2-202ENST00000398153 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-202ENST00000398153 GABARAPL1Q9H0R8 117 aa12.27□□□□□ -0.45
HDDC2-202ENST00000398153 DYNLRB1Q9NP97 96 aa12.27□□□□□ -0.45
HDDC2-202ENST00000398153 CGGBP1Q9UFW8 167 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-202ENST00000398153 LHFPL6Q9Y693 200 aa12.27□□□□□ -0.45
HDDC2-202ENST00000398153 RER1O15258 196 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 MT-ND5P03915 603 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 INHBBP09529 407 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 POU1F1P28069 291 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 GCH1P30793 250 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 GGT2P36268 569 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 WNT5AP41221 380 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 CRMP1Q14194 572 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 GINS1Q14691 196 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 PCK2Q16822 640 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 CCDC92Q53HC0 331 aaPredicted RBP12.26□□□□□ -0.45
HDDC2-202ENST00000398153 TEX30Q5JUR7 227 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 ELFN2Q5R3F8 820 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 SLC18B1Q6NT16 456 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF101Q8IZC7 436 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 HS3ST5Q8IZT8 346 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 CYB561A3Q8NBI2 242 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 MARS2Q96GW9 593 aaKnown RBP12.26□□□□□ -0.45
HDDC2-202ENST00000398153 COX4I2Q96KJ9 171 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 PRRG3Q9BZD7 231 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 SLC25A19Q9HC21 320 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
HDDC2-202ENST00000398153 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF469Q96JG9 3925 aaPredicted RBP12.26□□□□□ -0.45
HDDC2-202ENST00000398153 SURF4O15260 269 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 ABHD16AO95870 558 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 SLC25A16P16260 332 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF23P17027 643 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 SPI1P17947 270 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 DAPP51397 102 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 CRISP1P54107 249 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 PPP1CBP62140 327 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 TNK1Q13470 666 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 MEP1BQ16820 701 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 MSMPQ1L6U9 139 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 PCGF3Q3KNV8 242 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 KDM4DQ6B0I6 523 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 ACSM5Q6NUN0 579 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 RHOUQ7L0Q8 258 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF540Q8NDQ6 660 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 OR5L1Q8NGL2 311 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 SNX33Q8WV41 574 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 LRTOMTQ8WZ04 291 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 FAM168AQ92567 244 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 SYT3Q9BQG1 590 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 FN3KQ9H479 309 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 CYSLTR2Q9NS75 346 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 KRT84Q9NSB2 600 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 NKIRAS2Q9NYR9 191 aa12.25□□□□□ -0.45
HDDC2-202ENST00000398153 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.25□□□□□ -0.45
HDDC2-202ENST00000398153 A0A1W2PPW3 197 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 LOC390937A0A1W2PQ73 354 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PRR23D1E9PI22 279 aaPredicted RBP12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PRODHO43272 600 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 GPANK1O95872 356 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 ADRA2AP08913 450 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PRR23D2P0DMB1 279 aaPredicted RBP12.24□□□□□ -0.45
HDDC2-202ENST00000398153 ENTPD1P49961 510 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PDLIM4P50479 330 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 MRPS11P82912 194 aaKnown RBP12.24□□□□□ -0.45
HDDC2-202ENST00000398153 NKPD1Q17RQ9 610 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 ZMAT1Q5H9K5 638 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 OR9Q1Q8NGQ5 310 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 ABHD4Q8TB40 342 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 KLF14Q8TD94 323 aaPredicted RBP12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PTP4A1Q93096 173 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PLEKHA8Q96JA3 519 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 PITX2Q99697 317 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 ATF6BQ99941 703 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 REG4Q9BYZ8 158 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 MARCH7Q9H992 704 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 TAAR3PQ9P1P4 343 aa12.24□□□□□ -0.45
HDDC2-202ENST00000398153 RTTNQ86VV8 2226 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 TRIM64A6NGJ6 449 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 H7C1Q1 480 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 GLCEO94923 617 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 NGFP01138 241 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 PYCR1P32322 319 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 ERVS71-1P61550 626 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 KPNB1Q14974 876 aaKnown RBP12.23□□□□□ -0.45
HDDC2-202ENST00000398153 PTGES3Q15185 160 aaKnown RBP12.23□□□□□ -0.45
HDDC2-202ENST00000398153 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 LINC01590Q5TEZ4 76 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 RFPL4BQ6ZWI9 263 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 AMIGO2Q86SJ2 522 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 ICA1LQ8NDH6 482 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 SLC25A40Q8TBP6 338 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms