RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PTHP01270 115 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ANXA2P07355 339 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CNR2P34972 360 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR1D2P34982 312 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC19A1P41440 591 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ART1P52961 327 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ACLYP53396 1101 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RAG2P55895 527 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC10A1Q14973 349 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC36A2Q495M3 483 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CASP12Q6UXS9 341 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC22A15Q8IZD6 547 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC34A3Q8N130 599 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ACBD7Q8N6N7 88 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR56A1Q8NGH5 318 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ST6GALNAC5Q9BVH7 336 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SPHK2Q9NRA0 654 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 NECAP2Q9NVZ3 263 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR5H14A6NHG9 310 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 KIAA1324LA8MWY0 1029 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 GFYI3L273 518 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RNASET2O00584 256 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 PDCD5O14737 125 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 DSCR3O14972 297 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 FGF19O95750 216 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 IGHV2-5P01817 119 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CXCL10P02778 98 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 IFNW1P05000 195 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ATP1B2P14415 290 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF44P15621 663 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ACHEP22303 614 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CFHR2P36980 270 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 WNT3P56703 355 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 DEFA5Q01523 94 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 FCN2Q15485 313 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TNXAQ16473 311 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ANKRD55Q3KP44 614 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 AGBL4Q5VU57 503 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RHBDD2Q6NTF9 364 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 DRAM2Q6UX65 266 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RNF130Q86XS8 419 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR6V1Q8N148 313 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 BCORP1Q8N888 145 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 UBAC2Q8NBM4 344 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR2AP1Q8NGE2 309 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR14A16Q8NHC5 309 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM159Q96B96 161 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 FCRL1Q96LA6 429 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 KLF16Q9BXK1 252 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CDCA4Q9BXL8 241 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 PRO1933Q9H354 126 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 FBXL17Q9UF56 701 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF230Q9UIE0 474 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 A0A1W2PRX2 142 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM229AB2RXF0 380 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF561-AS1K7EIQ3 104 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 AP4M1O00189 453 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 GFRA2O00451 464 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 MYL12BO14950 172 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB29O14966 203 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 PPIHO43447 177 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 GDF9O60383 454 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OPN1SWP03999 348 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TBPP20226 339 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB7AP51149 207 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 POLR2LP62875 67 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CDK6Q00534 326 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 EXOSC2Q13868 293 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 PLAG1Q6DJT9 500 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 HIST2H2AA3Q6FI13 130 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 DPY19L4Q7Z388 723 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CRIPAKQ8N1N5 446 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 GPR26Q8NDV2 337 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 B3GNT7Q8NFL0 401 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 OR4S2Q8NH73 311 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ZCCHC10Q8TBK6 192 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RGP1Q92546 391 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 CMBLQ96DG6 245 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC35A4Q96G79 324 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 LYSMD1Q96S90 227 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC38A3Q99624 504 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM83DQ9H4H8 585 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM231Q9H6L2 316 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 HHATLQ9HCP6 504 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 TRAPPC4Q9Y296 219 aa5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 POLR3KQ9Y2Y1 108 aaPredicted RBP5.95□□□□□ -1.46
TM9SF4-202ENST00000398022 PCDH7O60245 1069 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 AKR1C4P17516 323 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TIA1P31483 386 aaKnown RBP eCLIP5.94□□□□□ -1.461e-11■■□□□ 14.5
TM9SF4-202ENST00000398022 OCIAD2Q56VL3 154 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 GRHL2Q6ISB3 625 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CCDC144NLQ6NUI1 221 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM205Q6UW68 189 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 RNF44Q7L0R7 432 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CPEB2Q7Z5Q1 589 aaKnown RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 GABRG1Q8N1C3 465 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 YIPF7Q8N8F6 280 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 MAL2Q969L2 176 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms