RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ZNF69Q9UC07 566 aa16.43■□□□□ 0.22
CHRFAM7A-202ENST00000397827 A0A1B0GUH1 482 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 DNASE2O00115 360 aaPredicted RBP16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 C17orf67Q0P5P2 114 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 METTL11BQ5VVY1 283 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 GUSBP11Q6P575 273 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 DCXRQ7Z4W1 244 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CDH26Q8IXH8 852 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CCDC36Q8IYA8 594 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OR1J4Q8NGS1 313 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TGIF2Q9GZN2 237 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ESRP2Q9H6T0 727 aaKnown RBP16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CA10Q9NS85 328 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SCP2D1Q9UJQ7 156 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TRBV11-1A0A0K0K1C0 115 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ANKUB1A6NFN9 424 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SSX5O60225 188 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 PRAF2O60831 178 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OPN1LWP04000 364 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ARRB1P49407 418 aaPredicted RBP16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 RAB11BQ15907 218 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TMEM71Q6P5X7 295 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 GLDNQ6ZMI3 551 aaPredicted RBP16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CATSPERDQ86XM0 798 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OR51A2Q8NGJ7 313 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 EMC6Q9BV81 110 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FSCN3Q9NQT6 498 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 PTTG3PQ9NZH4 202 aa16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MYEF2Q9P2K5 600 aaKnown RBP16.42■□□□□ 0.22
CHRFAM7A-202ENST00000397827 RALGAPA1Q6GYQ0 2036 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TMEM200CA6NKL6 621 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NPIPA5E9PKD4 350 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 H7C417 338 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SLC17A2O00624 439 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 APOC3P02656 99 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FOXF1Q12946 379 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SEZ6L2Q6UXD5 910 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 DNM1P46Q6ZS02 220 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OR52B4Q8NGK2 314 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OR4C16Q8NGL9 310 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 C15orf40Q8WUR7 153 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ASB10Q8WXI3 467 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NPDC1Q9NQX5 325 aaPredicted RBP16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MTFP1Q9UDX5 166 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CGGBP1Q9UFW8 167 aaPredicted RBP16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NPIPA1Q9UND3 350 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MUC3AQ02505 3323 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 PYCARD-AS1I3L0S3 204 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ALOX12BO75342 701 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NDUFB6O95139 128 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ZNF823P16415 610 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TLE3Q04726 772 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FAM69BQ5VUD6 431 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TSSK4Q6SA08 328 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MISPQ8IVT2 679 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SLC26A10Q8NG04 563 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 WDR89Q96FK6 387 aaPredicted RBP16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ATG5Q9H1Y0 275 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MGAT4CQ9UBM8 478 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NPTNQ9Y639 398 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 EXPH5Q8NEV8 1989 aa16.41■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TMEM272A0A1B0GTI8 110 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 LOC101059948A0A1B0GTJ6 334 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 DCDC2BA2VCK2 349 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 EIF1AYO14602 144 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 NDUFS6O75380 124 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SCRG1O75711 98 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 COL6A3P12111 3177 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 H1FNTQ75WM6 255 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 MEIOBQ8N635 442 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SLC25A44Q96H78 314 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 C5orf34Q96MH7 638 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 KLRF1Q9NZS2 232 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 EMC3Q9P0I2 261 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FBXL2Q9UKC9 423 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 IGLV3-12A0A075B6K2 115 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 LOC100289279A0A1B0GTE1 492 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FAM74A7A6NL05 159 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 POM121CA8CG34 1229 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 K7ESF4 209 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ABCD4O14678 606 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 LMX1BO60663 402 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SCAND1P57086 179 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 INPP5JQ15735 1006 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 FAM74A3Q4VXF1 159 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 GLYATL3Q5SZD4 288 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 OR8S1Q8NH09 359 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 ST8SIA1Q92185 356 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 DVL3Q92997 716 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 SHDQ96IW2 340 aa16.4■□□□□ 0.22
CHRFAM7A-202ENST00000397827 A0A1W2PQM1 296 aa16.39■□□□□ 0.21
CHRFAM7A-202ENST00000397827 A8MXK9 166 aa16.39■□□□□ 0.21
CHRFAM7A-202ENST00000397827 RGS11O94810 467 aa16.39■□□□□ 0.21
CHRFAM7A-202ENST00000397827 CD2P06729 351 aa16.39■□□□□ 0.21
CHRFAM7A-202ENST00000397827 CXCL12P48061 93 aa16.39■□□□□ 0.21
CHRFAM7A-202ENST00000397827 PTCRAQ6ISU1 281 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms