RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 FBXL3Q9UKT7 428 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 SRSF10O75494 262 aaKnown RBP24.09■■□□□ 1.45
CPNE1-203ENST00000397442 CRYBB2P43320 205 aa24.09■■□□□ 1.45
CPNE1-203ENST00000397442 MRPL28Q13084 256 aaKnown RBP24.09■■□□□ 1.45
CPNE1-203ENST00000397442 CCDC92Q53HC0 331 aaPredicted RBP24.09■■□□□ 1.45
CPNE1-203ENST00000397442 ARL9Q6T311 187 aa24.09■■□□□ 1.45
CPNE1-203ENST00000397442 Q6ZT83 130 aa24.09■■□□□ 1.45
CPNE1-203ENST00000397442 ST6GALNAC3Q8NDV1 305 aa24.09■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF878C9JN71 531 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 GPX5O75715 221 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 GABRA5P31644 462 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 RIDAP52758 137 aaKnown RBP24.08■■□□□ 1.45
CPNE1-203ENST00000397442 ST3GAL2Q16842 350 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 FDX2Q6P4F2 183 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 HAVCR2Q8TDQ0 301 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 TMEM203Q969S6 136 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 SMIM19Q96E16 107 aa24.08■■□□□ 1.45
CPNE1-203ENST00000397442 A0A096LPE4 126 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 A0A1W2PPZ6 126 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 PNPP00491 289 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 H2BFMP0C1H6 154 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 PATE4P0C8F1 98 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 IGHV1-2P23083 117 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 SH3BGRP55822 239 aaPredicted RBP24.08■■□□□ 1.44
CPNE1-203ENST00000397442 NFATC3Q12968 1075 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 SOWAHCQ53LP3 525 aaPredicted RBP24.08■■□□□ 1.44
CPNE1-203ENST00000397442 SLC16A14Q7RTX9 510 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 TRMT61AQ96FX7 289 aaKnown RBP24.08■■□□□ 1.44
CPNE1-203ENST00000397442 DDX28Q9NUL7 540 aaKnown RBP24.08■■□□□ 1.44
CPNE1-203ENST00000397442 FRRS1LQ9P0K9 344 aa24.08■■□□□ 1.44
CPNE1-203ENST00000397442 AIREO43918 545 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 FARS2O95363 451 aaKnown RBP24.07■■□□□ 1.44
CPNE1-203ENST00000397442 MMP7P09237 267 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-203ENST00000397442 ZNF32P17041 273 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 PSMA1P25786 263 aaKnown RBP24.07■■□□□ 1.44
CPNE1-203ENST00000397442 SLC3A1Q07837 685 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 PMPCAQ10713 525 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 SYT9Q86SS6 491 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 OR1K1Q8NGR3 316 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 OR2G2Q8NGZ5 317 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 SH3BGRL2Q9UJC5 107 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 STUB1Q9UNE7 303 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 PROCRQ9UNN8 238 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 SLC5A6Q9Y289 635 aa24.07■■□□□ 1.44
CPNE1-203ENST00000397442 TRBV2A0A0J9YWF9 115 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 LSM3P62310 102 aaKnown RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 MFGE8Q08431 387 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 ALKBH1Q13686 389 aaKnown RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 CD200R1LQ6Q8B3 271 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 GABRG1Q8N1C3 465 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 PRSS35Q8N3Z0 413 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 ZNF610Q8N9Z0 462 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 BCL2L2Q92843 193 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 GHSRQ92847 366 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 DCLRE1CQ96SD1 692 aaKnown RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 BCL7BQ9BQE9 202 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 CHCHD6Q9BRQ6 235 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 TMED9Q9BVK6 235 aa24.06■■□□□ 1.44
CPNE1-203ENST00000397442 OPN3Q9H1Y3 402 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-203ENST00000397442 TRIM64BA6NI03 449 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 ATE1O95260 518 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CD1AP06126 327 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CD8BP10966 210 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CD53P19397 219 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CTSSP25774 331 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 DCTDP32321 178 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 GDI2P50395 445 aaKnown RBP24.05■■□□□ 1.44
CPNE1-203ENST00000397442 ELFN2Q5R3F8 820 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 ANKRD16Q6P6B7 361 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 PDCD1LG2Q9BQ51 273 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 WACQ9BTA9 647 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CENPOQ9BU64 300 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 SFXN3Q9BWM7 321 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 ZNF503-AS2A6NEH8 195 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 COX5AP20674 150 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 NCS1P62166 190 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 PSG4Q00888 419 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 FABP5Q01469 135 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 SCRN3Q0VDG4 424 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 CNPY1Q3B7I2 92 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 TIMM50Q3ZCQ8 353 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 NCCRP1Q6ZVX7 275 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-203ENST00000397442 HIST2H2ABQ8IUE6 130 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-203ENST00000397442 C4orf45Q96LM5 186 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 OR2H1Q9GZK4 316 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 TIMM10BQ9Y5J6 103 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 R4GMQ9 66 aa24.05■■□□□ 1.44
CPNE1-203ENST00000397442 POLEQ07864 2286 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 A0A0G2JNJ9 132 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 LOC100506127A0A0U1RQW1 187 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 NOL3O60936 208 aaKnown RBP24.04■■□□□ 1.44
CPNE1-203ENST00000397442 ZFPL1O95159 310 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 TGFBR1P36897 503 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 KIR3DL2P43630 455 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 PCBD1P61457 104 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 VBP1P61758 197 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 RSPO1Q2MKA7 263 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-203ENST00000397442 WDR38Q5JTN6 314 aa24.04■■□□□ 1.44
CPNE1-203ENST00000397442 ZNF433Q8N7K0 673 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-203ENST00000397442 IL17RDQ8NFM7 739 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms