RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 M0R1B8 84 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 IGKV3-15P01624 115 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CELA3BP08861 270 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 PIPP12273 146 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 SEZ6L2Q6UXD5 910 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 MEX3BQ6ZN04 569 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 SPATC1Q76KD6 591 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 RFLNBQ8N5W9 214 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 FAM169BQ8N8A8 192 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CPEB3Q8NE35 698 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 TTTY10Q9BZA0 68 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 FGF20Q9NP95 211 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 NGBQ9NPG2 151 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 PRR14LQ5THK1 2151 aa20.52■□□□□ 0.88
TSPAN4-203ENST00000397397 A0A1W2PQL4 384 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 PHYHO14832 338 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 CASKO14936 926 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 PTHP01270 115 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 SERPINA5P05154 406 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF14P17017 642 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 HTR5AP47898 357 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ACTC1P68032 377 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ACTA1P68133 377 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ST3GAL4Q11206 333 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF584Q8IVC4 421 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 STX19Q8N4C7 294 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 ACBD7Q8N6N7 88 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 OR10S1Q8NGN2 331 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 OR1F12Q8NHA8 337 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 TMEM80Q96HE8 168 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 MS4A3Q96HJ5 214 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 HDHD2Q9H0R4 259 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 PNRC2Q9NPJ4 139 aaKnown RBP20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 CRIM1Q9NZV1 1036 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 PLEKHB1Q9UF11 243 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 LRCH1Q9Y2L9 728 aa20.52■□□□□ 0.87
TSPAN4-203ENST00000397397 IGHV1-18A0A0C4DH31 117 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 DAPL1A0PJW8 107 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 SYNGR3O43761 229 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 IGLV1-44P01699 117 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 CRHBPP24387 322 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 APEX1P27695 318 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 MYPOPQ86VE0 399 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 RNF133Q8WVZ7 376 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 ASB17Q8WXJ9 295 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 COPS4Q9BT78 406 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 FKBP14Q9NWM8 211 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 BLOC1S6Q9UL45 172 aa20.51■□□□□ 0.87
TSPAN4-203ENST00000397397 SETXQ7Z333 2677 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 ICE1Q9Y2F5 2266 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 OR6C6A6NF89 314 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF878C9JN71 531 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 IGHA1P01876 353 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 CECR9P0C854 216 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 COX5BP10606 129 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 EPXP11678 715 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 CRYGSP22914 178 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 STOMP27105 288 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 DCKP27707 260 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 APLNRP35414 380 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF85Q03923 595 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 TAF13Q15543 124 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 C3orf36Q3SXR2 165 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 KCTD18Q6PI47 426 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF322Q6U7Q0 402 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 SSX6Q7RTT6 188 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 SLC30A7Q8NEW0 376 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 FAM222BQ8WU58 562 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 IPCEF1Q8WWN9 437 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 MYDGFQ969H8 173 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 COQ7Q99807 217 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 ATF6BQ99941 703 aa20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 DIMT1Q9UNQ2 313 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-203ENST00000397397 USP9YO00507 2555 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 ECH1Q13011 328 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 KRT77Q7Z794 578 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 LHFPL3Q86UP9 236 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 ACBD4Q8NC06 268 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 YTHDF1Q9BYJ9 559 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 INPP5EQ9NRR6 644 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 DDX28Q9NUL7 540 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 PAK1IP1Q9NWT1 392 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 SLCO1C1Q9NYB5 712 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 IKZF2Q9UKS7 526 aa20.49■□□□□ 0.87
TSPAN4-203ENST00000397397 PRR32B1ATL7 298 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 PSMD9O00233 223 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 ADRA2AP08913 450 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 H2BFMP0C1H6 154 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 CCL2P13500 99 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 GDI2P50395 445 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SLC35A2P78381 396 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 MVKQ03426 396 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 TBC1D28Q2M2D7 210 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 TMEM108Q6UXF1 575 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 LRRN1Q6UXK5 716 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 OR1J2Q8NGS2 313 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SNX33Q8WV41 574 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SLC7A6Q92536 515 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SGCDQ92629 289 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms