RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 SF3B5Q9BWJ5 86 aaKnown RBP13.19□□□□□ -0.3
CAPN3-207ENST00000397200 CLCF1Q9UBD9 225 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF835Q9Y2P0 537 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 COL6A6A6NMZ7 2263 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 A6NIZ1 184 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 AQP8O94778 261 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ZFPL1O95159 310 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 PLGP00747 810 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 KRT8P05787 483 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 HOXD4P09016 255 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF43P17038 809 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ELK1P19419 428 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 RAP1BP61224 184 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 RAP1AP62834 184 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ALKBH1Q13686 389 aaKnown RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 POU4F3Q15319 338 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 P2RY14Q15391 338 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 PYDC2Q56P42 97 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 C1orf185Q5T7R7 199 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 MCEMP1Q8IX19 187 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 OR6N2Q8NGY6 317 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ABHD3Q8WU67 409 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 OR14A2Q96R54 314 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 CALHM2Q9HA72 323 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 MRPL22Q9NWU5 206 aaKnown RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 ABRACLQ9P1F3 81 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 LAMP5Q9UJQ1 280 aa13.18□□□□□ -0.3
CAPN3-207ENST00000397200 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-207ENST00000397200 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 PIN1P1O15428 100 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 TGM6O95932 706 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 EPXP11678 715 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 CTLA4P16410 223 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 NPR2P20594 1047 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
CAPN3-207ENST00000397200 SLC17A1Q14916 467 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
CAPN3-207ENST00000397200 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 HSD17B12Q53GQ0 312 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 NSUN5P2Q63ZY6 315 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 NHLRC1Q6VVB1 395 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 DPY19L4Q7Z388 723 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 NRARPQ7Z6K4 114 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 DOLPP1Q86YN1 238 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 OR9K2Q8NGE7 335 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 ASB17Q8WXJ9 295 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 HSD17B8Q92506 261 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 WNT2BQ93097 391 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 DERL3Q96Q80 235 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 OR8B4Q96RC9 309 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 OR4C45A6NMZ5 311 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF716A6NP11 495 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 CRABP1P29762 137 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 CASP6P55212 293 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 ROM1Q03395 351 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 MELKQ14680 651 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 SLC35D2Q76EJ3 337 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 IL17RDQ8NFM7 739 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
CAPN3-207ENST00000397200 KCNK17Q96T54 332 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 FRRS1LQ9P0K9 344 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
CAPN3-207ENST00000397200 CENPBD1B2RD01 187 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 PSMD9O00233 223 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 GPR171O14626 319 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 PLA2G10O15496 165 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-207ENST00000397200 GPANK1O95872 356 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 PRB1P04280 392 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
CAPN3-207ENST00000397200 IFNGR1P15260 489 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 ATF1P18846 271 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 PCK2Q16822 640 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 RTL6Q6ICC9 239 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 Q8N402 240 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 YIPF7Q8N8F6 280 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 OR2G2Q8NGZ5 317 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 ZC3HAV1LQ96H79 300 aaKnown RBP13.16□□□□□ -0.3
CAPN3-207ENST00000397200 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 AMELYQ99218 206 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 RNF122Q9H9V4 155 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 NOX4Q9NPH5 578 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms