RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 EMC7Q9NPA0 242 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 MYEF2Q9P2K5 600 aaKnown RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 ASH2LQ9UBL3 628 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 TCRBV5S2A0A599 114 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 LMX1BO60663 402 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 TFP02787 698 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 HPXP02790 462 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 HIST1H1CP16403 213 aaKnown RBP11.91□□□□□ -0.5
SEC13-204ENST00000397099 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
SEC13-204ENST00000397099 CRYBB2P43320 205 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 SLC3A1Q07837 685 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 OR1F12Q8NHA8 337 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 COQ7Q99807 217 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 BEX2Q9BXY8 128 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 B9D1Q9UPM9 204 aa11.91□□□□□ -0.5
SEC13-204ENST00000397099 IGLV1-36A0A0B4J1U3 117 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 ARRDC5A6NEK1 342 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 RNF212BA8MTL3 300 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 GYG2O15488 501 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
SEC13-204ENST00000397099 LILRA1O75019 489 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 SCG5P05408 212 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 FAM157CP0CG43 387 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 TNFSF4P23510 183 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 THBS2P35442 1172 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 CENPAP49450 140 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 RASSF2P50749 326 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 MMP15P51511 669 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 BLVRAP53004 296 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 ERVS71-1P61550 626 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 MICAQ29983 383 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 HFEQ30201 348 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 HIST2H3PS2Q5TEC6 136 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 ZNF770Q6IQ21 691 aaPredicted RBP11.9□□□□□ -0.5
SEC13-204ENST00000397099 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 RFPL4BQ6ZWI9 263 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 OR6V1Q8N148 313 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 SLC26A10Q8NG04 563 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 OR4C15Q8NGM1 316 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 OR4K13Q8NH42 304 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 PTP4A1Q93096 173 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
SEC13-204ENST00000397099 TIMD4Q96H15 378 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 C1orf159Q96HA4 380 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 KLHL21Q9UJP4 597 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 SAMHD1Q9Y3Z3 626 aaKnown RBP11.9□□□□□ -0.5
SEC13-204ENST00000397099 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.5
SEC13-204ENST00000397099 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 IGHV1-69-2A0A0G2JMI3 117 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 B4DSR2 109 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 BHLHE40O14503 412 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 SURF4O15260 269 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 CST1P01037 141 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 GAAP10253 952 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 ANPEPP15144 967 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 RAC2P15153 192 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 MAGEB1P43366 347 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 CCL8P80075 99 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 MS4A2Q01362 244 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 LNX2Q8N448 690 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 AQP11Q8NBQ7 271 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 OR2T33Q8NG76 320 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 OR2AJ1Q8NGZ0 328 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 APOBEC3DQ96AK3 386 aaPredicted RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 BTBD10Q9BSF8 475 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 SRA1Q9HD15 236 aaKnown RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 RPRD1BQ9NQG5 326 aaKnown RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
SEC13-204ENST00000397099 GRIP1Q9Y3R0 1128 aa11.89□□□□□ -0.51
SEC13-204ENST00000397099 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CLDN25C9JDP6 229 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 ACOT8O14734 319 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
SEC13-204ENST00000397099 TIMM8AO60220 97 aaPredicted RBP11.88□□□□□ -0.51
SEC13-204ENST00000397099 RP2O75695 350 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 TGFAP01135 160 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 NGFP01138 241 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 GASTP01350 101 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 IFNGP01579 166 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 HLA-DQA2P01906 255 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CD55P08174 381 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 ZNF823P16415 610 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 KITLGP21583 273 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms