RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PRSS37A4D1T9 235 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 LRP5LA4QPB2 252 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 SLC22A31A6NKX4 558 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 FAM183AA6NL82 134 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 IGHG1P01857 330 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 OR4A8P0C604 315 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CECR9P0C854 216 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CRHBPP24387 322 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 IL2RGP31785 369 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 SERPINF1P36955 418 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CDKN2AP42771 156 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CLDN17P56750 224 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CLRN1P58418 232 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 RPS7P62081 194 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 HGFACQ04756 655 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 TMED1Q13445 227 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 MELKQ14680 651 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CARTPTQ16568 116 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 SMN1Q16637 294 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 KCTD21Q4G0X4 260 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 KLHL12Q53G59 568 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF362Q5T0B9 420 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 ARMC4Q5T2S8 1044 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 LCN1P1Q5VSP4 162 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 AADACL4Q5VUY2 407 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 NIPAL3Q6P499 406 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 DNM1P34Q6PK57 102 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 MEPCEQ7L2J0 689 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 WDFY1Q8IWB7 410 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 POMGNT2Q8NAT1 580 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CYB561A3Q8NBI2 242 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 NPEPL1Q8NDH3 523 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF540Q8NDQ6 660 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 OR2T4Q8NH00 348 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 OR6X1Q8NH79 312 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 FNDC8Q8TC99 324 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 IPCEF1Q8WWN9 437 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 MYDGFQ969H8 173 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 SLC25A44Q96H78 314 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 TXNDC15Q96J42 360 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 VRK1Q99986 396 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 OR51V1Q9H2C8 321 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 CCNB1IP1Q9NPC3 277 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 HINT3Q9NQE9 182 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 RPRD1BQ9NQG5 326 aaKnown RBP8.93□□□□□ -0.98
NEDD8-202ENST00000396828 MED29Q9NX70 200 aa8.93□□□□□ -0.98
NEDD8-202ENST00000396828 LOC100289279A0A1B0GTE1 492 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 TMEM129A0AVI4 362 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 OR6C68A6NDL8 312 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 EFCAB10A6NFE3 127 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 CENPBD1B2RD01 187 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF587BE7ETH6 402 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 PTGES3LE9PB15 166 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 TRAF3IP2O43734 574 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 XPNPEP2O43895 674 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 KRT33AO76009 404 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF432O94892 652 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 WNT11O96014 354 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 IGLV1-44P01699 117 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 LYNP07948 512 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 CRABP1P29762 137 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 HTR1FP30939 366 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ATP6V1E1P36543 226 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 MTNR1AP48039 350 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 CENPAP49450 140 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 PDLIM4P50479 330 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 BLVRAP53004 296 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 SLC25A1P53007 311 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 GABARAPL2P60520 117 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 NAAAQ02083 359 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 APOFQ13790 326 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 KLHL22Q53GT1 634 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 SLC35D3Q5M8T2 416 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 PHYHD1Q5SRE7 291 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 THEM4Q5T1C6 240 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 LAIR2Q6ISS4 152 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 BCDIN3DQ7Z5W3 292 aaKnown RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 PTP4A1Q93096 173 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 RBP7Q96R05 134 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ALG12Q9BV10 488 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 EMC6Q9BV81 110 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 BPESC1Q9GZL8 116 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF696Q9H7X3 374 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 MED20Q9H944 212 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 CNOT2Q9NZN8 540 aaKnown RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 VSX1Q9NZR4 365 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 CRNNQ9UBG3 495 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 WARS2Q9UGM6 360 aaKnown RBP8.92□□□□□ -0.98
NEDD8-202ENST00000396828 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
NEDD8-202ENST00000396828 ARPC4-TTLL3A0A0A6YYG9 625 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SLC22A23A1A5C7 686 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 LYNX1G3V0Z9 82 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 H7C1C5 153 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 RGS10O43665 173 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 MRPS14O60783 128 aaKnown RBP8.91□□□□□ -0.98
NEDD8-202ENST00000396828 SLC43A1O75387 559 aa8.91□□□□□ -0.98
NEDD8-202ENST00000396828 TRMUO75648 421 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms