RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MBP02144 154 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 FZD2Q14332 565 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF511Q8NB15 262 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR2AE1Q8NHA4 323 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CCDC74AQ96AQ1 378 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SARAFQ96BY9 339 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF799Q96GE5 643 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 UBE2ZQ9H832 354 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ANKRD10Q9NXR5 420 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 USP22Q9UPT9 525 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 RGPD3A6NKT7 1758 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 POM121BA6NF01 834 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ST8SIA3O43173 380 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 MT-ND4LP03901 98 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 NKX2-1P43699 371 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ISL1P61371 349 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OTUD1Q5VV17 481 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF620Q6ZNG0 422 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 LILRB4Q8NHJ6 448 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 MITD1Q8WV92 249 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 GNPNAT1Q96EK6 184 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 FBXL4Q9UKA2 621 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PDCD11Q14690 1871 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ST8SIA5O15466 376 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZGLP1P0C6A0 271 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SSBP1Q04837 148 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF750Q32MQ0 723 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR2A2Q6IF42 318 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CPEB2Q7Z5Q1 589 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OXGR1Q96P68 337 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF416Q9BWM5 594 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLC5A6Q9Y289 635 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 NTNG1Q9Y2I2 539 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CBR3O75828 277 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR2F2O95006 317 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CRYAAP02489 173 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CSN1S1P47710 185 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ETV1P50549 477 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 RPL11P62913 178 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 BTN1A1Q13410 526 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR2F1Q13607 317 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PHLDA2Q53GA4 152 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR8G2PQ6IF36 304 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 LILRA3Q8N6C8 439 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 LINC01599Q8WXQ3 324 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLAMF6Q96DU3 332 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 REEP6Q96HR9 211 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ATF6BQ99941 703 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLC6A17Q9H1V8 727 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 DLL4Q9NR61 685 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CLEC2DQ9UHP7 191 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PRSS37A4D1T9 235 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 FRG2CA6NGY1 282 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 LGALS8O00214 317 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 IMPA2O14732 288 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 EDIL3O43854 480 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PRKRAO75569 313 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 NRASP01111 189 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 TPBGQ13641 420 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 VWA2Q5GFL6 755 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ADGRG3Q86Y34 549 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 NKAIN4Q8IVV8 208 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR51F2Q8NH61 342 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 MARC2Q969Z3 335 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ELF4Q99607 663 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PATZ1Q9HBE1 687 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF346Q9UL40 294 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 C5orf49A4QMS7 147 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 I6L893 689 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ADAM10O14672 748 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PRICKLE3O43900 615 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 TAGLN2P37802 199 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 GABRA4P48169 554 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PPIAP62937 165 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SSX2Q16385 188 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 IL34Q6ZMJ4 242 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 DBX2Q6ZNG2 339 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 EXD3Q8N9H8 876 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 TEX101Q9BY14 249 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 RPH3ALQ9UNE2 315 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 POM121CA8CG34 1229 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TRAPPC2P0DI81 140 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TRAPPC2BP0DI82 140 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TAS2R45P59539 299 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 AQP6Q13520 282 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 CTU2Q2VPK5 515 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM31Q5JXX7 168 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 TIGD3Q6B0B8 471 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 RTN4RL1Q86UN2 441 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 FAM71CQ8NEG0 241 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 EDARADDQ8WWZ3 215 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 GPR78Q96P69 363 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 SOX7Q9BT81 388 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 EMC6Q9BV81 110 aa4.97□□□□□ -1.61
VPS13C-204ENST00000395898 EXO1Q9UQ84 846 aaKnown RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 GIPP09681 153 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-204ENST00000395898 EDN3P14138 238 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms