RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 EPHA6Q9UF33 1036 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 IGHV3-20A0A0C4DH32 117 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 A0A1W2PPC1 479 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 TMEM235A6NFC5 223 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 PHYHO14832 338 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 ABCD3P28288 659 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 LTBRP36941 435 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 SSBP1Q04837 148 aaKnown RBP18.49■□□□□ 0.55
CLK3-202ENST00000395066 LANCL3Q6ZV70 420 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 ACBD4Q8NC06 268 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 STEAP2Q8NFT2 490 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 OR1J2Q8NGS2 313 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 PCP4L1A6NKN8 68 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 SOX1O00570 391 aaPredicted RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 CCSO14618 274 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 ABCD4O14678 606 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 MELTFP08582 738 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 CFPP27918 469 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 SLC6A8P48029 635 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 ARHGDIBP52566 201 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 RIDAP52758 137 aaKnown RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 ACTBP60709 375 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 ACTG1P63261 375 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 LRRC37A5PQ49AS3 106 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 C1orf140Q5VVS0 124 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 MOB3CQ70IA8 216 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 BPIFCQ8NFQ6 507 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 CMBLQ96DG6 245 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 NKX6-2Q9C056 277 aaPredicted RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 DUSP15Q9H1R2 295 aaPredicted RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 TMEM185BQ9H7F4 350 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 IGKV3D-11A0A0A0MRZ8 115 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 IGKV1D-43A0A0B4J1Z2 117 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 TLCD2A6NGC4 264 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 TSPAN2O60636 221 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 TAS2R19P59542 299 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 PDSS1Q5T2R2 415 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 FDX2Q6P4F2 183 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 CATSPERDQ86XM0 798 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 OR13C3Q8NGS6 347 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 THAP3Q8WTV1 239 aaPredicted RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 SLC41A2Q96JW4 573 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 POTEKPQ9BYX7 375 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 WDR13Q9H1Z4 485 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 TXNIPQ9H3M7 391 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 PRMT8Q9NR22 394 aaPredicted RBP18.48■□□□□ 0.55
CLK3-202ENST00000395066 HPF1Q9NWY4 346 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 PRELID3BQ9Y3B1 194 aa18.48■□□□□ 0.55
CLK3-202ENST00000395066 ABCA7Q8IZY2 2146 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 KANTRA0A1W2PQU2 76 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 FGL1Q08830 312 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 SLC22A6Q4U2R8 563 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CLVS2Q5SYC1 327 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 JMJD6Q6NYC1 403 aaPredicted RBP18.47■□□□□ 0.55
CLK3-202ENST00000395066 RTN4RL2Q86UN3 420 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CD163Q86VB7 1156 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 KCNRGQ8N5I3 272 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 OR5T2Q8NGG2 359 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 WWTR1Q9GZV5 400 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 ATXN7L1Q9ULK2 861 aaPredicted RBP18.47■□□□□ 0.55
CLK3-202ENST00000395066 FER1L5A0AVI2 2057 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 OR5H14A6NHG9 310 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CD8AP01732 235 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 GLULP15104 373 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 PGCP20142 388 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CNR1P21554 472 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 GALNSP34059 522 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 EIF1AXP47813 144 aaKnown RBP18.47■□□□□ 0.55
CLK3-202ENST00000395066 FLI1Q01543 452 aaPredicted RBP18.47■□□□□ 0.55
CLK3-202ENST00000395066 BEX5Q5H9J7 111 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 LIN54Q6MZP7 749 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CKLFQ9UBR5 152 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 KLK13Q9UKR3 277 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 ZNF175Q9Y473 711 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 CPAMD8Q8IZJ3 1885 aa18.47■□□□□ 0.55
CLK3-202ENST00000395066 LOC107986453A0A1B0GWG9 222 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 C2CD4DB7Z1M9 353 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 ALG1L2C9J202 215 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 PLPP3O14495 311 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 LUMP51884 338 aaPredicted RBP18.46■□□□□ 0.55
CLK3-202ENST00000395066 ELOCQ15369 112 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 PABPC1L2AQ5JQF8 200 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 GLT8D1Q68CQ7 371 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 DCXRQ7Z4W1 244 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 OR4D6Q8NGJ1 314 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 ASB17Q8WXJ9 295 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 EDAQ92838 391 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 FAM46BQ96A09 425 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 NARS2Q96I59 477 aaKnown RBP18.46■□□□□ 0.55
CLK3-202ENST00000395066 ARL5BQ96KC2 179 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 SLC25A21Q9BQT8 299 aaPredicted RBP18.46■□□□□ 0.55
CLK3-202ENST00000395066 SLC17A5Q9NRA2 495 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 GPN3Q9UHW5 284 aaPredicted RBP18.46■□□□□ 0.55
CLK3-202ENST00000395066 MSRAQ9UJ68 235 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 SPAG17Q6Q759 2223 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 DNASE1L1P49184 302 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 OR1D5P58170 312 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 OR52N5Q8NH56 324 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 OR1L3Q8NH93 324 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 CYYR1Q96J86 154 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms