RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 DEFB107AQ8IZN7 70 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 NPEPL1Q8NDH3 523 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 OR8D4Q8NGM9 314 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 OR4K13Q8NH42 304 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 TMEM186Q96B77 213 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 CMBLQ96DG6 245 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 SAMD8Q96LT4 415 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 NMNAT3Q96T66 252 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 BTBD10Q9BSF8 475 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PLA2G12AQ9BZM1 189 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 LRMDAQ9H2I8 198 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 KCNN2Q9H2S1 579 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 OR52D1Q9H346 318 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 FN3KQ9H479 309 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 RERGLQ9H628 205 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF665Q9H7R5 613 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 IL1RAPQ9NPH3 570 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PNRC2Q9NPJ4 139 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 TBCCD1Q9NVR7 557 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 HIF1ANQ9NWT6 349 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PURGQ9UJV8 347 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 B9D1Q9UPM9 204 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 SAMD4AQ9UPU9 718 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 ARL2BPQ9Y2Y0 163 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 FAM32AQ9Y421 112 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 LYVE1Q9Y5Y7 322 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 XKRYO14609 159 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ARPC3O15145 178 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 PLPP2O43688 288 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 VENTXO95231 258 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 GADD45GO95257 159 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 MSMBP08118 114 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 CD55P08174 381 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 NR2C1P13056 603 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 KITLGP21583 273 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZFP36P26651 326 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 RRM2P31350 389 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 GGT2P36268 569 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 MAGEA2P43356 314 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 HMGA2P52926 109 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SELENOVP59797 346 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 LSM6P62312 80 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SPIBQ01892 262 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 HLXQ14774 488 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 FAM209AQ5JX71 171 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SAMD4BQ5PRF9 694 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 C1orf94Q6P1W5 598 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 CYP2R1Q6VVX0 501 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF620Q6ZNG0 422 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 CFAP77Q6ZQR2 320 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 RINLQ6ZS11 566 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF771Q7L3S4 317 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 RRM2BQ7LG56 351 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 NAA40Q86UY6 237 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZBTB46Q86UZ6 589 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SLC26A10Q8NG04 563 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 OR9Q2Q8NGE9 314 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 OR10S1Q8NGN2 331 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 OR1F12Q8NHA8 337 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SGMS2Q8NHU3 365 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ZFAND2BQ8WV99 257 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 HAVCR1Q96D42 359 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 NSMCE2Q96MF7 247 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 ERMAPQ96PL5 475 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SIGLEC11Q96RL6 698 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 EGLN3Q9H6Z9 239 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SAP30LQ9HAJ7 183 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 MRPL22Q9NWU5 206 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 EIF3KQ9UBQ5 218 aaKnown RBP7.48□□□□□ -1.21
ATG4A-205ENST00000394892 OPN4Q9UHM6 478 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 MAGEL2Q9UJ55 1249 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 GRIP1Q9Y3R0 1128 aa7.48□□□□□ -1.21
ATG4A-205ENST00000394892 H0YL77 283 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 H3BSA7 217 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 BHLHE40O14503 412 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 ABHD16AO95870 558 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 GASTP01350 101 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 IGHV2-70P01814 119 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 FABP3P05413 133 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 ITGA2P17301 1181 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 CFPP27918 469 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 GCH1P30793 250 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 PMELP40967 661 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 ACTG1P63261 375 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-205ENST00000394892 SCRN3Q0VDG4 424 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 COX10Q12887 443 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 AQP6Q13520 282 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 KRT72Q14CN4 511 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 MTX3Q5HYI7 312 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 SLC35F1Q5T1Q4 408 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 SLC18B1Q6NT16 456 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 LEG1Q6P5S2 330 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 ADCK1Q86TW2 530 aa7.47□□□□□ -1.21
ATG4A-205ENST00000394892 LINC00346Q8IVM7 164 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms