RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 BPIFB2Q8N4F0 458 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CADM4Q8NFZ8 388 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 OR13C8Q8NGS7 320 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF721Q8TF20 911 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 RELTQ969Z4 430 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CMKLR1Q99788 373 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 WDR13Q9H1Z4 485 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 TXNIPQ9H3M7 391 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 MRTO4Q9UKD2 239 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 A0A1W2PR77 199 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 OR5H14A6NHG9 310 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 H0YIG0 161 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 SRSF10O75494 262 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 MPZL1O95297 269 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 DDAH2O95865 285 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 CYB5AP00167 134 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 MT-ATP6P00846 226 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 CD74P04233 296 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 IGKV3-11P04433 115 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 AGTR1P30556 359 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 CLVS2Q5SYC1 327 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 SLC6A7Q99884 636 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 RASL12Q9NYN1 266 aa16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 FARSAQ9Y285 508 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-202ENST00000394633 A0A0D9SG52 128 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF736B4DX44 427 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 CD38P28907 300 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 IL12BP29460 328 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SRSF4Q08170 494 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SPOCK1Q08629 439 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 JMJD6Q6NYC1 403 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 KCNRGQ8N5I3 272 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 OR10K1Q8NGX5 313 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 OR52N5Q8NH56 324 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 NUDT9Q9BW91 350 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SLCO5A1Q9H2Y9 848 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SOHLH2Q9NX45 425 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 CACNA1EQ15878 2313 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 IGHV5-51A0A0C4DH38 117 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 LMX1BO60663 402 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 TSPAN9O75954 239 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 DXOO77932 396 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 GP1BBP13224 206 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 CD34P28906 385 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 GFERP55789 205 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SCGB2B2Q4G0G5 96 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 CORO6Q6QEF8 472 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 OR13C3Q8NGS6 347 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 FBXW5Q969U6 566 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF587Q96SQ5 575 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 SLC38A3Q99624 504 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 BARX1Q9HBU1 254 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 EMC9Q9Y3B6 208 aa16.43■□□□□ 0.22
PCDHA1-202ENST00000394633 TMED7-TICAM2A0A0A6YYA0 188 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TMEM235A6NFC5 223 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TMEM150CB9EJG8 249 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 CCSO14618 274 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 SIGLEC5O15389 551 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TSPAN2O60636 221 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 NPIPB7O75200 414 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 APOC3P02656 99 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 LIPCP11150 499 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 OR1D4P47884 311 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 DNASE1L1P49184 302 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 SIGLEC14Q08ET2 396 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 ZMYND11Q15326 602 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 JAGN1Q8N5M9 183 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 OR4S1Q8NGB4 309 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 B3GNT4Q9C0J1 378 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 ZC4H2Q9NQZ6 224 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TNFSF18Q9UNG2 199 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 COA3Q9Y2R0 106 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TMED7Q9Y3B3 224 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 R4GMQ9 66 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 WIPF3A6NGB9 483 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 CSN2P05814 226 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 PGCP20142 388 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 NR0B1P51843 470 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 FGL1Q08830 312 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 SQSTM1Q13501 440 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TGM7Q96PF1 710 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 TMEM185BQ9H7F4 350 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 GPN3Q9UHW5 284 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF107Q9UII5 783 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 HHLA2Q9UM44 414 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 NOP16Q9Y3C1 178 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 RHBDD3Q9Y3P4 386 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 RP1P56715 2156 aa16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 ARID1BQ8NFD5 2236 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-202ENST00000394633 A0A0A6YYH2 397 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 FITM1A5D6W6 292 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 A6NJ64 397 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 ALG1L2C9J202 215 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 PLPP3O14495 311 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 IGHMP01871 453 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 PPM1FP49593 454 aaPredicted RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 CSNK1EP49674 416 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 EFNA3P52797 238 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms