RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FBXL2Q9UKC9 423 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 NCOR1O75376 2440 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 MS4A18H0YCH9 400 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 H3BML4 177 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 LDOC1O95751 146 aaPredicted RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 LPLP06858 475 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 PGCP20142 388 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 RAP2BP61225 183 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 MS4A18Q3C1V0 323 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 KMT5CQ86Y97 462 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 RELL2Q8NC24 303 aaPredicted RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 OR1N1Q8NGS0 311 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SAP25Q8TEE9 199 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 TNFAIP8L1Q8WVP5 186 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 CCNL2Q96S94 520 aaPredicted RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM185BQ9H7F4 350 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 PRMT8Q9NR22 394 aaPredicted RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 KLK13Q9UKR3 277 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 A0A1B0GTQ1 180 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 LOC107986453A0A1B0GWG9 222 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SNRPGP15A8MWD9 76 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 KCNAB3O43448 404 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 NMBP08949 121 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 AKAIN1P0CW23 69 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC6A8P48029 635 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 POLR2HP52434 150 aaKnown RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 MAP2K6P52564 334 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 RIDAP52758 137 aaKnown RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 RAB14P61106 215 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 DHODHQ02127 395 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC29A4Q7RTT9 530 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 OR13C3Q8NGS6 347 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 GPX8Q8TED1 209 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 PNPLA2Q96AD5 504 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 APMAPQ9HDC9 416 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 G6PC2Q9NQR9 355 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 PILRBQ9UKJ0 227 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC5A6Q9Y289 635 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
GTF2F1-201ENST00000394456 PATE3B3GLJ2 98 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 HTR2CP28335 458 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 C11orf88Q6PI97 169 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 IDO2Q6ZQW0 420 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 CD163Q86VB7 1156 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 OR6N1Q8NGY5 312 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 OR52N5Q8NH56 324 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 VSX1Q9NZR4 365 aaPredicted RBP12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 MRTO4Q9UKD2 239 aaKnown RBP12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 CPAMD8Q8IZJ3 1885 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 CELSR3Q9NYQ7 3312 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 A8MVM7 634 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 FTCDNL1E5RQL4 147 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 GDF9O60383 454 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF432O94892 652 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 SPDEFO95238 335 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 CSF1P09603 554 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 KLK2P20151 261 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 DLX5P56178 289 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 POU3F1Q03052 451 aaPredicted RBP12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 IKZF1Q13422 519 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 LY6G6FQ5SQ64 297 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 OR52W1Q6IF63 320 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 RHBDD2Q6NTF9 364 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 GALNT11Q8NCW6 608 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 RADILQ96JH8 1075 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 B3GNT4Q9C0J1 378 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 GAREM1Q9H706 876 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 KCNN3Q9UGI6 736 aa12.04□□□□□ -0.48
GTF2F1-201ENST00000394456 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 IGHV5-10-1A0A0J9YXX1 117 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 F5H5P2 479 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 RAB3DO95716 219 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 AMY2AP04746 511 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 PPP3CBP16298 524 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 IGFBP3P17936 291 aaPredicted RBP12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 ROM1Q03395 351 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 STPG2Q8N412 459 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF441Q8N8Z8 693 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 MRI1Q9BV20 369 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 DUSP23Q9BVJ7 150 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SDHAF2Q9NX18 166 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 TECTAO75443 2155 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 EFNA2O43921 213 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SCRG1O75711 98 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 AHSA1O95433 338 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms