RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 HEPN1Q6WQI6 88 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 ZSCAN4Q8NAM6 433 aaPredicted RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 KXD1Q9BQD3 176 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 NRSN2Q9GZP1 204 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 MED31Q9Y3C7 131 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 TMED3Q9Y3Q3 217 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 CLDN4O14493 209 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 F10P00742 488 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 DCNP07585 359 aaKnown RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 TACR3P29371 465 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 AQP2P41181 271 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 NAA10P41227 235 aaPredicted RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 DUSP8Q13202 625 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 TGIF1Q15583 401 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 FAM24BQ8N5W8 94 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 PRRT1Q99946 306 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 RGCCQ9H4X1 137 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 STARD10Q9Y365 291 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 NARSO43776 548 aaKnown RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 SULT1A1P50225 295 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 EFNB2P52799 333 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 KIR2DS3Q14952 304 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 ELOCQ15369 112 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 AKIRIN2Q53H80 203 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 FBXO42Q6P3S6 717 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF574Q6ZN55 896 aaPredicted RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 CCDC74AQ96AQ1 378 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 RRNAD1Q96FB5 475 aaKnown RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 TCTN2Q96GX1 697 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 SOX7Q9BT81 388 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 GPR174Q9BXC1 333 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 VSIG4Q9Y279 399 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 MEIS3P1A6NDR6 274 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 TAAR5O14804 337 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 B3GALT2O43825 422 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 MED6O75586 246 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 PLGP00747 810 aaPredicted RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 SMIM10L1P0DMW3 83 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF10P21506 573 aaPredicted RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 PPP1R1AQ13522 171 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF585AQ6P3V2 769 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 BIVMQ86UB2 503 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 C19orf47Q8N9M1 422 aaKnown RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 TM4SF19Q96DZ7 209 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 SMIM10Q96HG1 83 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 IP6K3Q96PC2 410 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 SDF2Q99470 211 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 MRPL37Q9BZE1 423 aaKnown RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 PISDQ9UG56 409 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 CHRNA9Q9UGM1 479 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 GDF2Q9UK05 429 aaPredicted RBP16.99■□□□□ 0.31
HOXC6-202ENST00000394331 C2orf16Q68DN1 1984 aa16.99■□□□□ 0.31
HOXC6-202ENST00000394331 ELOA3CA0A087WX78 387 aaPredicted RBP16.98■□□□□ 0.31
HOXC6-202ENST00000394331 CXorf65A6NEN9 183 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 GRXCR1A8MXD5 290 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 K7EQS6 105 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 NTSR1P30989 418 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 DUSP5Q16690 384 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 BPIFB2Q8N4F0 458 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 OR5AK2Q8NH90 309 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 THRSPQ92748 146 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 RAB24Q969Q5 203 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 FBRSQ9HAH7 460 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 DOCK9Q9BZ29 2069 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 DUS4LO95620 317 aaKnown RBP16.98■□□□□ 0.31
HOXC6-202ENST00000394331 EML2O95834 649 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 TACSTD2P09758 323 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 OR1Q1Q15612 314 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 DEFB134Q4QY38 66 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF595Q8IYB9 648 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 OR1E3Q8WZA6 343 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 OR2A5Q96R48 311 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 PIGQQ9BRB3 760 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 KCNG2Q9UJ96 466 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 DAPP1Q9UN19 280 aa16.98■□□□□ 0.31
HOXC6-202ENST00000394331 GOLGA4Q13439 2230 aaKnown RBP16.98■□□□□ 0.31
HOXC6-202ENST00000394331 TRAV27A0A087WT01 109 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF736B4DX44 427 aaPredicted RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 CYB5AP00167 134 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 RNH1P13489 461 aaKnown RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 PTNP21246 168 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 UCP2P55851 309 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 NUTF2P61970 127 aaKnown RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 OR5R1Q8NH85 324 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ZCCHC10Q8TBK6 192 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 SECTM1Q8WVN6 248 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ELSPBP1Q96BH3 223 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 MISP3Q96FF7 219 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 DNAJB11Q9UBS4 358 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 PRAMEF26H0Y7S4 382 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 ADAM10O14672 748 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 CPMP14384 443 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 AK4P27144 223 aaPredicted RBP16.97■□□□□ 0.31
HOXC6-202ENST00000394331 IL13RA1P78552 427 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 RUNX2Q13950 521 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 PRRT3Q5FWE3 981 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 UBAC2Q8NBM4 344 aa16.97■□□□□ 0.31
HOXC6-202ENST00000394331 OR52E2Q8NGJ4 325 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms