RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ABHD16AO95870 558 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 HPXP02790 462 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 HEXAP06865 529 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 DAOP14920 347 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF250P15622 560 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 GSTM3P21266 225 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ANOS1P23352 680 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 PCSK6P29122 969 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 GGT2P36268 569 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RAD52P43351 418 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RASSF2P50749 326 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 KLF3P57682 345 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 PPP1CBP62140 327 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 LSM6P62312 80 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 GINS1Q14691 196 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 KCNMB1Q16558 191 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 TSTQ16762 297 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 TMEM236Q5W0B7 351 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC18B1Q6NT16 456 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ACSM5Q6NUN0 579 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RPL13AP3Q6NVV1 102 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 CCDC121Q6ZUS5 278 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ASRGL1Q7L266 308 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 AMIGO2Q86SJ2 522 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 SYT9Q86SS6 491 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ALDH16A1Q8IZ83 802 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 LNX2Q8N448 690 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ATG16L2Q8NAA4 619 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF511Q8NB15 262 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR1F12Q8NHA8 337 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 LRTOMTQ8WZ04 291 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 POP5Q969H6 163 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 MARS2Q96GW9 593 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 SNX18Q96RF0 628 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RHNO1Q9BSD3 238 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RBM4Q9BWF3 364 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 RAB1BQ9H0U4 201 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 SEMA6AQ9H2E6 1030 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 YY1AP1Q9H869 796 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 EIF3KQ9UBQ5 218 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 NDRG4Q9ULP0 352 aaKnown RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 IGLV3-9A0A075B6K5 115 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 IGHV4-61A0A0C4DH41 118 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ARRDC5A6NEK1 342 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZSCAN5BA6NJL1 495 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 RIIAD1A6NNX1 92 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 INAFM1C9JVW0 142 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 F5H5K5 113 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 M0R129 80 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 SPRY3O43610 288 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CDC14BO60729 498 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CIB2O75838 187 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 SPARCP09486 303 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 OSMP13725 252 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF3P17036 446 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 SPI1P17947 270 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 COL8A2P25067 703 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 GCH1P30793 250 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 GRK5P34947 590 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 EVX1P49640 407 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PDLIM4P50479 330 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 DAPP51397 102 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 HIST1H3AP68431 136 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 COX10Q12887 443 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 GGTLC2Q14390 218 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 HLXQ14774 488 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 TRIP10Q15642 601 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ATP6AP1Q15904 470 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 SPRNQ5BIV9 151 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ELFN2Q5R3F8 820 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 HIST2H3PS2Q5TEC6 136 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PLBD1Q6P4A8 553 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 SHQ1Q6PI26 577 aaKnown RBP6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CD300LDQ6UXZ3 194 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 HIST2H3AQ71DI3 136 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 NAA40Q86UY6 237 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 BBS1Q8NFJ9 593 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 GJC3Q8NFK1 279 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR10S1Q8NGN2 331 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR6K6Q8NGW6 343 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR2T4Q8NH00 348 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 KLF14Q8TD94 323 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PYDC1Q8WXC3 89 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 YIPF5Q969M3 257 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PITX2Q99697 317 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PIMREGQ9BSJ6 248 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CDADC1Q9BWV3 514 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 NMNAT2Q9BZQ4 307 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 BPESC1Q9GZL8 116 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF556Q9HAH1 456 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 MSL2Q9HCI7 577 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PNRC2Q9NPJ4 139 aaKnown RBP6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 HINT3Q9NQE9 182 aaKnown RBP6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 TREM2Q9NZC2 230 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 PTTG3PQ9NZH4 202 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 KIF17Q9P2E2 1029 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 CYB5R1Q9UHQ9 305 aa6.55□□□□□ -1.36
HMGB3P1-201ENST00000393368 KLHL21Q9UJP4 597 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms