RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 HDDC3Q8N4P3 179 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 FADS6Q8N9I5 356 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 GPR82Q96P67 336 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 METTL7AQ9H8H3 244 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 MTCH1Q9NZJ7 389 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 SLC17A7Q9P2U7 560 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 VANGL2Q9ULK5 521 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 MEMO1Q9Y316 297 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 MFHAS1Q9Y4C4 1052 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 KCNE3Q9Y6H6 103 aa0.15□□□□□ -2.39
TRAJ48-201ENST00000390489 DOCK6Q96HP0 2047 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 PLXNA3P51805 1871 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 A0A087WZY1 265 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 KRBOX1C9JBD0 128 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 SCGNO76038 276 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 CTSGP08311 255 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 P0DMU3 169 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 FAM231AP0DMU4 169 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 FAM231CP0DMU5 169 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 OR5H8P0DN80 308 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 CEACAM3P40198 252 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 CDKN2DP55273 166 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 GFERP55789 205 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 TWF1Q12792 350 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 SCGB2A2Q13296 93 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 BTN1A1Q13410 526 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 SELPLGQ14242 412 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 DMC1Q14565 340 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 TPD52L1Q16890 204 aaPredicted RBP0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 DAZ4Q86SG3 579 aaKnown RBP0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 ERO1BQ86YB8 467 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 OR4M1Q8NGD0 313 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 SLC2A14Q8TDB8 520 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 UBE2Q2Q8WVN8 375 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 CTNNBL1Q8WYA6 563 aaPredicted RBP0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 OSTF1Q92882 214 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 DCPSQ96C86 337 aaKnown RBP0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 FAM111AQ96PZ2 611 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 OR2V2Q96R30 315 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 DAZ1Q9NQZ3 744 aaKnown RBP0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 ZNF302Q9NR11 478 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 U3KQV3 271 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 PALLDQ8WX93 1383 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 COL4A1P02462 1669 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 TSPOAP1O95153 1857 aa0.14□□□□□ -2.39
TRAJ48-201ENST00000390489 KIAA1671Q9BY89 1806 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 EIF4E2O60573 245 aaKnown RBP0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 SLC35G6P0C7Q6 338 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 PPT1P50897 306 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 YBEYP58557 167 aaPredicted RBP0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 MXD1Q05195 221 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 XKR7Q5GH72 579 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 N4BP2L1Q5TBK1 243 aaPredicted RBP0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 ZNF660Q6AZW8 331 aaPredicted RBP0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 MSANTD4Q8NCY6 345 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 TRPV1Q8NER1 839 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 OR2Z1Q8NG97 314 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 SERPINB12Q96P63 405 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 SLC7A8Q9UHI5 535 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 CAMTA1Q9Y6Y1 1673 aa0.13□□□□□ -2.39
TRAJ48-201ENST00000390489 GBF1Q92538 1859 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 STRCP1A6NGW2 1772 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 BRD4O60885 1362 aaPredicted RBP0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 TRGV4A0A0C4DH28 118 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 F6UB75 175 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 NVLO15381 856 aaKnown RBP0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 CDS2O95674 445 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 CD1CP29017 333 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 OTX1P32242 354 aaPredicted RBP0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 GMFBP60983 142 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 IL5RAQ01344 420 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 MRPL28Q13084 256 aaKnown RBP0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 CHRNA6Q15825 494 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 COX18Q8N8Q8 333 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 MFSD9Q8NBP5 474 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 OR10G6Q8NH81 332 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 MARVELD1Q9BSK0 173 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 PARD6BQ9BYG5 372 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 AZI2Q9H6S1 392 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 MOSPD1Q9UJG1 213 aa0.12□□□□□ -2.39
TRAJ48-201ENST00000390489 RPRD2Q5VT52 1461 aaKnown RBP0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 GABRR3A8MPY1 467 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 GOLGA8SH3BPF8 625 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 K7EMT4 169 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 PSCAO43653 123 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 GATBO75879 557 aaKnown RBP0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 CLDN9O95484 217 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 PTBP3O95758 552 aaKnown RBP0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 CA8P35219 290 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 CHI3L1P36222 383 aaPredicted RBP0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 RPL23P62829 140 aaKnown RBP0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 SIGLEC14Q08ET2 396 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 AP1B1Q10567 949 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 PAGE2Q7Z2X7 111 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 ANKFN1Q8N957 763 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 OR1J4Q8NGS1 313 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 OR52N1Q8NH53 320 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 YIPF5Q969M3 257 aa0.11□□□□□ -2.39
TRAJ48-201ENST00000390489 CPNE4Q96A23 557 aaPredicted RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms