RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CPB2Q96IY4 423 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CEP19Q96LK0 163 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 LINC00477Q96M19 166 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 VPS35Q96QK1 796 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 HIST1H4GQ99525 98 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CGREF1Q99674 301 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CHID1Q9BWS9 393 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TEKT3Q9BXF9 490 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ULBP2Q9BZM5 246 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TM6SF2Q9BZW4 377 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 DRC3Q9H069 523 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 IFI27L2Q9H2X8 130 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ELOVL6Q9H5J4 265 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RANBP3Q9H6Z4 567 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ELOVL3Q9HB03 270 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SLC40A1Q9NP59 571 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RAB18Q9NP72 206 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 C20orf96Q9NUD7 363 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SMOXQ9NWM0 555 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SLC2A8Q9NY64 477 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ADA2Q9NZK5 511 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PIPOXQ9P0Z9 390 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SLC17A7Q9P2U7 560 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CLEC2DQ9UHP7 191 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ZNF639Q9UID6 485 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PSMD13Q9UNM6 376 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 OR10H1Q9Y4A9 318 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 POLR3AO14802 1390 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CPDO75976 1380 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 MN1Q10571 1320 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 IGHV1OR21-1A0A087WYE8 117 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 A0A0A6YYH2 397 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 IGHV2-70DA0A0C4DH43 119 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SMCO2A6NFE2 343 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 FABP12A6NFH5 140 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 A6NJ64 397 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 E7ESA3 106 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 H0YJX3 145 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 KLRC4-KLRK1H3BQV0 150 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TEX46H3BTG2 121 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TOR1AO14656 332 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 AIM2O14862 343 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TOX3O15405 576 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 RS1O15537 224 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ZSCAN12O43309 604 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 DENRO43583 198 aaKnown RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 GATCO43716 136 aaKnown RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TIMM8AO60220 97 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 H6PDO95479 791 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 RAB3DO95716 219 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TSPAN12O95859 305 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CST1P01037 141 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 IGLV2-23P01705 113 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SERPINE2P07093 398 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 FABP1P07148 127 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ERCC1P07992 297 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 OR4E1P0C645 316 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CISD3P0C7P0 127 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SLC35E2BP0CK96 405 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CALM1P0DP23 149 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CALM2P0DP24 149 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CALM3P0DP25 149 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 PSKH1P11801 424 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ATF6P18850 670 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 POLR2EP19388 210 aaKnown RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 GSTM3P21266 225 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ALDH3A1P30838 453 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ACTR1BP42025 376 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CDKN2CP42773 168 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 VDAC2P45880 294 aaPredicted RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TGM4P49221 684 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 GNG10P50151 68 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SERPINB9P50453 376 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CCR8P51685 355 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 DLX1P56177 255 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CACNG7P62955 275 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ADARB1P78563 741 aaKnown RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CDK16Q00536 496 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 CYP24A1Q07973 514 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 PJVKQ0ZLH3 352 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 BST2Q10589 180 aaKnown RBP1.49□□□□□ -2.17
TRAV40-201ENST00000390467 STX5Q13190 355 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 STX3Q13277 289 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SLAMF1Q13291 335 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 GNMTQ14749 295 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 VAMP3Q15836 100 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 MICBQ29980 383 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 GOLGA7BQ2TAP0 167 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 ACTBL2Q562R1 376 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 PRR9Q5T870 116 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TMEM225Q6GV28 225 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 FRMPD2BQ6IN97 320 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 H3F3CQ6NXT2 135 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 TMEM107Q6UX40 140 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 FAM151BQ6UXP7 276 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 HSDL2Q6YN16 418 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 LRRC74BQ6ZQY2 392 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SSX9Q7RTT3 188 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 C16orf62Q7Z3J2 963 aa1.49□□□□□ -2.17
TRAV40-201ENST00000390467 SNX20Q7Z614 316 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms