RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 GPR4P46093 362 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 HTR5AP47898 357 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 RGS6P49758 472 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 SMIM11AP58511 58 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 DCAF12L2Q5VW00 463 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 FAM122BQ7Z309 247 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 SPICQ8N5J4 248 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 CLDN22Q8N7P3 220 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 NANPQ8TBE9 248 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 SLC7A13Q8TCU3 470 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 ST7LQ8TDW4 575 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 SAMD8Q96LT4 415 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 Q96M85 177 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 NRIP3Q9NQ35 241 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 PLEK2Q9NYT0 353 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 ADAM18Q9Y3Q7 739 aa11.02□□□□□ -0.65
RPAIN-202ENST00000381208 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 FOXH1O75593 365 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 NGFP01138 241 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 KITLGP21583 273 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 EPHA1P21709 976 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 CPT2P23786 658 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 PRDX6P30041 224 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 LIMS1P48059 325 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 NUDT2P50583 147 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 RPS6KA3P51812 740 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 PSG7Q13046 419 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 CDK5R2Q13319 367 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 KRR1Q13601 381 aaKnown RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 KRT72Q14CN4 511 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 MESTQ5EB52 335 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 TBPL2Q6SJ96 375 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 C12orf54Q6X4T0 127 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 DPY19L2P2Q6ZN68 376 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 GLB1L2Q8IW92 636 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 OR5L1Q8NGL2 311 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 ELAC2Q9BQ52 826 aaKnown RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 SPAG4Q9NPE6 437 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 VSX1Q9NZR4 365 aaPredicted RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 PURGQ9UJV8 347 aaKnown RBP11.01□□□□□ -0.65
RPAIN-202ENST00000381208 PCDHB10Q9UN67 800 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 SIGLEC7Q9Y286 467 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 NPTNQ9Y639 398 aa11.01□□□□□ -0.65
RPAIN-202ENST00000381208 ISPDA4D126 451 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 H7C1C5 153 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 TRIM77I1YAP6 450 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 PTP4A3O75365 173 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 TXNDC12O95881 172 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 RAC2P15153 192 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 CTLA4P16410 223 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 CRABP1P29762 137 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 HILS1P60008 231 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 PSME3P61289 254 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 LCN6P62502 163 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 TMEM155Q4W5P6 130 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 FGD3Q5JSP0 725 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 GLYATQ6IB77 296 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 SLC27A4Q6P1M0 643 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
RPAIN-202ENST00000381208 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 PTP4A1Q93096 173 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 RASD2Q96D21 266 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 HAVCR1Q96D42 359 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 FAM46AQ96IP4 442 aaKnown RBP11□□□□□ -0.65
RPAIN-202ENST00000381208 RBM4Q9BWF3 364 aaKnown RBP11□□□□□ -0.65
RPAIN-202ENST00000381208 SUCNR1Q9BXA5 334 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 TMPRSS13Q9BYE2 586 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 MSL2Q9HCI7 577 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 EMC7Q9NPA0 242 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 DCAF13Q9NV06 445 aaKnown RBP11□□□□□ -0.65
RPAIN-202ENST00000381208 NDUFAF4Q9P032 175 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 IL19Q9UHD0 177 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 CACNG2Q9Y698 323 aa11□□□□□ -0.65
RPAIN-202ENST00000381208 OR6C6A6NF89 314 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 IMPA2O14732 288 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 SLC16A7O60669 478 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 VENTXO95231 258 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 FPR2P25090 351 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 IFNGR2P38484 337 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 OMPP47874 163 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 KCNMB1Q16558 191 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 KLHL36Q8N4N3 616 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 ZNF283Q8N7M2 679 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 GJC3Q8NFK1 279 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 OR1F12Q8NHA8 337 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 FAM216AQ8WUB2 273 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 RSRC1Q96IZ7 334 aaKnown RBP10.99□□□□□ -0.65
RPAIN-202ENST00000381208 DHRS1Q96LJ7 313 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 HDHD2Q9H0R4 259 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 SYT4Q9H2B2 425 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 GORASP2Q9H8Y8 452 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 ASH2LQ9UBL3 628 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms