RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 FOXRED1Q96CU9 486 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 DHRS9Q9BPW9 319 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 SLC25A21Q9BQT8 299 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 C1orf198Q9H425 327 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 POFUT1Q9H488 388 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 SLC22A11Q9NSA0 550 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 ZNF107Q9UII5 783 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 NUP50Q9UKX7 468 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 ASCC3Q8N3C0 2202 aaKnown RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 FXYD6-FXYD2A0A087WZ82 144 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 TMEM82A0PJX8 343 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 ZNF208O43345 1280 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 DOK2O60496 412 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 RP2O75695 350 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 PPP3CBP16298 524 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 RAB6AP20340 208 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 IGFBP4P22692 258 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 AFF3P51826 1226 aaKnown RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 GMFBP60983 142 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 OC90Q02509 493 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 PMPCAQ10713 525 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 HLXQ14774 488 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 DCAF12L2Q5VW00 463 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 IDO2Q6ZQW0 420 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 TMUB2Q71RG4 321 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 SLC25A45Q8N413 288 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 NFAM1Q8NET5 270 aaPredicted RBP10.66□□□□□ -0.7
TRIM23-203ENST00000381018 PMEPA1Q969W9 287 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 C5orf34Q96MH7 638 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 GAL3ST1Q99999 423 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 NUDT22Q9BRQ3 303 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 FXYD6Q9H0Q3 95 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 NARFLQ9H6Q4 476 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 MED11Q9P086 117 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 VDAC3Q9Y277 283 aa10.66□□□□□ -0.7
TRIM23-203ENST00000381018 SDK1Q7Z5N4 2213 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 IGLV3-12A0A075B6K2 115 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 H3BUI4 141 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 M0QYG6 137 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 P2RY10O00398 339 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 ZNF354AO60765 605 aaPredicted RBP10.65□□□□□ -0.7
TRIM23-203ENST00000381018 AMY2AP04746 511 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 HEXBP07686 556 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 OR4E1P0C645 316 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 MMP16P51512 607 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 FOXF1Q12946 379 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 SQSTM1Q13501 440 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 B3GNTL1Q67FW5 361 aaPredicted RBP10.65□□□□□ -0.7
TRIM23-203ENST00000381018 ARSKQ6UWY0 536 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 RABEPKQ7Z6M1 372 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 WDFY1Q8IWB7 410 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 GALNT16Q8N428 558 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 OR10H5Q8NGA6 315 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 NUBPLQ8TB37 319 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 RNF133Q8WVZ7 376 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 FOXQ1Q9C009 403 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 CHST6Q9GZX3 395 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 CENPMQ9NSP4 180 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 MED29Q9NX70 200 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 ALKBH4Q9NXW9 302 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 RDH8Q9NYR8 311 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 ZNF224Q9NZL3 707 aa10.65□□□□□ -0.7
TRIM23-203ENST00000381018 IGKV1D-43A0A0B4J1Z2 117 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 TRBV11-1A0A0K0K1C0 115 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 LIPT2A6NK58 231 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ZNF736B4DX44 427 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 B8ZZF3 427 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 EIF1AYO14602 144 aaKnown RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 BCAT2O15382 392 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 LMX1BO60663 402 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ZNF250P15622 560 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 NAGAP17050 411 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ZNF41P51814 821 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 GPR85P60893 370 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 SFRP5Q5T4F7 317 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 CORO6Q6QEF8 472 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 NAXDQ8IW45 347 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 RBPMSQ93062 196 aaKnown RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 TINAGL1Q9GZM7 467 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ARL6Q9H0F7 186 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 MYOZ1Q9NP98 299 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 MYEF2Q9P2K5 600 aaKnown RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 KCNN3Q9UGI6 736 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 B3GALT5Q9Y2C3 310 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 LAMA1P25391 3075 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 USP34Q70CQ2 3546 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 LOC101059948A0A1B0GTJ6 334 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 A0A1W2PNV4 684 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 hCG_1807616A0A1W2PRN6 198 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 METTL21EPA6NDL7 271 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 H3BML4 177 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 TOX3O15405 576 aaPredicted RBP10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ALOX12BO75342 701 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 CD74P04233 296 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 ACSM4P0C7M7 580 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 GIMD1P0DJR0 217 aa10.64□□□□□ -0.71
TRIM23-203ENST00000381018 BCKDHBP21953 392 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms