RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 CNN2Q99439 309 aaKnown RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 ANKRD60Q9BZ19 345 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 PNRC2Q9NPJ4 139 aaKnown RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 PLEK2Q9NYT0 353 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 RAB26Q9ULW5 256 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 LOC100509620A0A075B734 347 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 IQCMA0A1B0GVH7 501 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 FAM221AA4D161 298 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 OR6C6A6NF89 314 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 ABCD4O14678 606 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 DOK2O60496 412 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 SBK2P0C263 348 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 MYF6P23409 242 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 STOMP27105 288 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 CALCRP30988 508 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 NAAAQ02083 359 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 ZNF91Q05481 1191 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 EIF2B1Q14232 305 aaKnown RBP10.98□□□□□ -0.65
SMN1-202ENST00000380707 RAB35Q15286 201 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 SHFQ7M4L6 423 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 CDC20BQ86Y33 519 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 PAQR4Q8N4S7 273 aaPredicted RBP10.98□□□□□ -0.65
SMN1-202ENST00000380707 OR4F15Q8NGB8 312 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 SLC7A6Q92536 515 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 AMELYQ99218 206 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 FBXL3Q9UKT7 428 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 KLHDC2Q9Y2U9 406 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 ROS1P08922 2347 aa10.98□□□□□ -0.65
SMN1-202ENST00000380707 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
SMN1-202ENST00000380707 IGHV2OR16-5A0A0B4J2B6 119 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 SNTNA6NMZ2 147 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 CTAG2O75638 210 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 PLAUP00749 431 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 CD3EP07766 207 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 DBTP11182 482 aaKnown RBP10.97□□□□□ -0.65
SMN1-202ENST00000380707 ZNF35P13682 527 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 ALOX5APP20292 161 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 ATP6V1E1P36543 226 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 HTR5AP47898 357 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 NR1H2P55055 460 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
SMN1-202ENST00000380707 ELFN2Q5R3F8 820 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 SPATC1Q76KD6 591 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 RFLNBQ8N5W9 214 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 OR1F12Q8NHA8 337 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 THEM6Q8WUY1 208 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 LGALS12Q96DT0 336 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 POM121L2Q96KW2 1035 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 TMEM204Q9BSN7 226 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 ABHD6Q9BV23 337 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 C1orf198Q9H425 327 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
SMN1-202ENST00000380707 C5orf49A4QMS7 147 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 SHISA9B4DS77 424 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 ATP6V1G2-DDX39BF2Z307 99 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 J3QRE1 110 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 PTHP01270 115 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 CRYAAP02489 173 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 LYNP07948 512 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 DBHP09172 617 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 COX5BP10606 129 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 CCNOP22674 350 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 APLNRP35414 380 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 POU4F2Q12837 409 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 ADAM5Q6NVV9 412 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 SLC22A25Q6T423 547 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 SLC35F2Q8IXU6 374 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 IL17RDQ8NFM7 739 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 RNF133Q8WVZ7 376 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 SLAMF6Q96DU3 332 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 CNBD2Q96M20 576 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 ATF6BQ99941 703 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 RHNO1Q9BSD3 238 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 HDHD2Q9H0R4 259 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 EXOGQ9Y2C4 368 aaKnown RBP10.96□□□□□ -0.65
SMN1-202ENST00000380707 RPL36Q9Y3U8 105 aaKnown RBP10.96□□□□□ -0.65
SMN1-202ENST00000380707 RNF115Q9Y4L5 304 aa10.96□□□□□ -0.65
SMN1-202ENST00000380707 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
SMN1-202ENST00000380707 PRR32B1ATL7 298 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 SLC15A1P46059 708 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 GDI2P50395 445 aaKnown RBP10.95□□□□□ -0.66
SMN1-202ENST00000380707 CXCR4P61073 352 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 TLE4Q04727 773 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 HGFACQ04756 655 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 KRTAP27-1Q3LI81 207 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 OR10H4Q8NGA5 316 aa10.95□□□□□ -0.66
SMN1-202ENST00000380707 LILRB1Q8NHL6 650 aaPredicted RBP10.95□□□□□ -0.66
SMN1-202ENST00000380707 NEUROG1Q92886 237 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms