RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CD200R1Q8TD46 325 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 MITD1Q8WV92 249 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 SMPDL3AQ92484 453 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 BPIFA2Q96DR5 249 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 SLC22A12Q96S37 553 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 STACQ99469 402 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
PTPRA-204ENST00000380393 MKKSQ9NPJ1 570 aaPredicted RBP8.48□□□□□ -1.05
PTPRA-204ENST00000380393 PLSCR4Q9NRQ2 329 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
PTPRA-204ENST00000380393 TVP23AA6NH52 213 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 TRBC1P01850 177 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 MNX1P50219 401 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ACSM3Q53FZ2 586 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 OR1P1Q8NH06 330 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SOHLH2Q9NX45 425 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SLC25A13Q9UJS0 675 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 MTCL1Q9Y4B5 1905 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 A0A1B0GTI1 187 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SERPINE3A8MV23 424 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 A8MVM7 634 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 EEF1E1-BLOC1S5C9J1V9 151 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 PRAMEF26H0Y7S4 382 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 BHLHE40O14503 412 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 NME6O75414 186 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 FGF1P05230 155 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SDC1P18827 310 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ACVR1BP36896 505 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 HSF1Q00613 529 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ARHGAP11BQ3KRB8 267 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 GALNT16Q8N428 558 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 TOP6BLQ8N6T0 577 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 RAB39BQ96DA2 213 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 DERL3Q96Q80 235 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 MIEN1Q9BRT3 115 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SGPP1Q9BX95 441 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 C1QTNF2Q9BXJ5 285 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CIPCQ9C0C6 399 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 TRIM36Q9NQ86 728 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 PARP11Q9NR21 331 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CSAG2Q9Y5P2 127 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 MYO7AQ13402 2215 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SRPX2O60687 465 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 GPANK1O95872 356 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 OR4Q2P0C623 313 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 OR5G3P0C626 314 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 LIPCP11150 499 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF7P17097 686 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ELAVL4P26378 380 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CST5P28325 142 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CHATP28329 748 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 PRRX1P54821 245 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 RPS26P62854 115 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 NFATC4Q14934 902 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CNN3Q15417 329 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SOHLH1Q5JUK2 328 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 UNQ9370/PRO34162Q6UXP9 181 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 RTN4RL1Q86UN2 441 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 ZBTB2Q8N680 514 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 OR5W2Q8NH69 310 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 OR2V1Q8NHB1 315 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 MFSD8Q8NHS3 518 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 RPUSD4Q96CM3 377 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 S100A16Q96FQ6 103 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 DPH1Q9BZG8 443 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 SMG9Q9H0W8 520 aaKnown RBP8.47□□□□□ -1.05
PTPRA-204ENST00000380393 CAPN10Q9HC96 672 aa8.47□□□□□ -1.05
PTPRA-204ENST00000380393 A0A1W2PQH9 124 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 FFAR1O14842 300 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 FCMRO60667 390 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 PDYNP01213 254 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 IL3P08700 152 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 TEAD1P28347 426 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 PCSK1P29120 753 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 TMEM33P57088 247 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 PMS2P11Q13670 270 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 OR2D3Q8NGH3 330 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 OR2L2Q8NH16 312 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF596Q8TC21 504 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 CASTOR1Q8WTX7 329 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 EDAQ92838 391 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 APIPQ96GX9 242 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 KLHDC3Q9BQ90 382 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF700Q9H0M5 742 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 NUDT4Q9NZJ9 180 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 IL17CQ9P0M4 197 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.05
PTPRA-204ENST00000380393 HEATR5AQ86XA9 2040 aa8.46□□□□□ -1.05
PTPRA-204ENST00000380393 J3KRW8 73 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 FAAHO00519 579 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF749O43361 778 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 B3GAT3O94766 335 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms