RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 PIP4P1Q86T03 277 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 OR10S1Q8NGN2 331 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 S100A16Q96FQ6 103 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 CMTM3Q96MX0 182 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 HES7Q9BYE0 225 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 ABCG5Q9H222 651 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 RNF121Q9H920 327 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 PLA2G3Q9NZ20 509 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 STEAP1Q9UHE8 339 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 MEIOCA2RUB1 952 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 RER1O15258 196 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 CXCL13O43927 109 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 ACHEP22303 614 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 MMP16P51512 607 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 PRKXP51817 358 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 ART1P52961 327 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 POU4F3Q15319 338 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 OR1C1Q15619 314 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 TMEM244Q5VVB8 128 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 GGNQ86UU5 652 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 OR2M7Q8NG81 312 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 NKD1Q969G9 470 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 PNPLA2Q96AD5 504 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 FAM173AQ9BQD7 235 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 RBM24Q9BX46 236 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 ETV7Q9Y603 341 aa13.09□□□□□ -0.31
RAB3IP-203ENST00000378809 ISG15P05161 165 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 AGFG1P52594 562 aaKnown RBP13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 COMMD2Q86X83 199 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 UBASH3BQ8TF42 649 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 IP6K3Q96PC2 410 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 PBOV1Q9GZY1 135 aa13.08□□□□□ -0.31
RAB3IP-203ENST00000378809 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ITGA5P08648 1049 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 SUCLG1P53597 346 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 FOXO1Q12778 655 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 GPR176Q14439 515 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 TGIF1Q15583 401 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 GLRX5Q86SX6 157 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 OR51D1Q8NGF3 324 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 OR10D3Q8NH80 312 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 RAB40AQ8WXH6 277 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 YIPF5Q969M3 257 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ZNF416Q9BWM5 594 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 AUNIPQ9H7T9 357 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
RAB3IP-203ENST00000378809 CELSR3Q9NYQ7 3312 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 A6NL46 340 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 CENPXA8MT69 81 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 SYT7O43581 403 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 DNPH1O43598 174 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 LMX1BO60663 402 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 CCNKO75909 580 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 ACSM4P0C7M7 580 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 SLC2A1P11166 492 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 MSR1P21757 451 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 GNALP38405 381 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 SPOCK1Q08629 439 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 RAB11BQ15907 218 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 TMEM123Q8N131 208 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 LRRC18Q8N456 261 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 TMEM54Q969K7 222 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 NELFAQ9H3P2 528 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 FOXJ3Q9UPW0 622 aa13.07□□□□□ -0.32
RAB3IP-203ENST00000378809 ARPC4-TTLL3A0A0A6YYG9 625 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 FAM166BA8MTA8 275 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 TTRP02766 147 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 CDK2P24941 298 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 DCTDP32321 178 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 PSMA6P60900 246 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 GALK2Q01415 458 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 HACD4Q5VWC8 232 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 SULF2Q8IWU5 870 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 HAVCR1Q96D42 359 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 ITPKCQ96DU7 683 aa13.06□□□□□ -0.32
RAB3IP-203ENST00000378809 SF3B5Q9BWJ5 86 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms