RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SAMHD1Q9Y3Z3 626 aaKnown RBP13.12□□□□□ -0.31
RAB4B-202ENST00000378307 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
RAB4B-202ENST00000378307 WNT9BO14905 357 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RP2O75695 350 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 TACSTD2P09758 323 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RAP2AP10114 183 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 CRABP1P29762 137 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 SELENOVP59797 346 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RSPO1Q2MKA7 263 aaPredicted RBP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 SPRNQ5BIV9 151 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RDH5Q92781 318 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 WACQ9BTA9 647 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 RACGAP1Q9H0H5 632 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 REEP1Q9H902 201 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 NDRG4Q9ULP0 352 aaKnown RBP13.11□□□□□ -0.31
RAB4B-202ENST00000378307 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 GRIP1Q9Y3R0 1128 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 CACNG2Q9Y698 323 aa13.11□□□□□ -0.31
RAB4B-202ENST00000378307 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 GYG2O15488 501 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 IDH3BO43837 385 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 CDC14BO60729 498 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 SOX14O95416 240 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 ABHD16AO95870 558 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 RENP00797 406 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 IGHV1-46P01743 117 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 PSKH1P11801 424 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 NOS3P29474 1203 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 GCH1P30793 250 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 ERFP50548 548 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 TEKQ02763 1124 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 PSG7Q13046 419 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
RAB4B-202ENST00000378307 LYPD4Q6UWN0 246 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 HIPK1Q86Z02 1210 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 LINC00346Q8IVM7 164 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 OR1F12Q8NHA8 337 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 LRGUKQ96M69 825 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 DGCR6LQ9BY27 220 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 ELOVL3Q9HB03 270 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 ARMC1Q9NVT9 282 aa13.1□□□□□ -0.31
RAB4B-202ENST00000378307 MRPL22Q9NWU5 206 aaKnown RBP13.1□□□□□ -0.31
RAB4B-202ENST00000378307 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 SPRY3O43610 288 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 ACHEP22303 614 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 PYCR1P32322 319 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 RPS27P42677 84 aaKnown RBP13.09□□□□□ -0.31
RAB4B-202ENST00000378307 GZMKP49863 264 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 COX10Q12887 443 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 CFAP77Q6ZQR2 320 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 AQP12AQ8IXF9 295 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 SLC37A3Q8NCC5 494 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 OR10G2Q8NGC3 310 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 SNX33Q8WV41 574 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
RAB4B-202ENST00000378307 CHODLQ9H9P2 273 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 TBCCD1Q9NVR7 557 aa13.09□□□□□ -0.31
RAB4B-202ENST00000378307 DNHD1Q96M86 4753 aa13.08□□□□□ -0.31
RAB4B-202ENST00000378307 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.32
RAB4B-202ENST00000378307 LOC100289279A0A1B0GTE1 492 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 DHRS12A0PJE2 317 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 GSC2O15499 205 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 CST1P01037 141 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 GGT2P36268 569 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 ZNF81P51508 661 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 CCNIQ14094 377 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 DNAL1Q4LDG9 190 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 SLC18B1Q6NT16 456 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 RPL13AP3Q6NVV1 102 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 HS3ST5Q8IZT8 346 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 LNX2Q8N448 690 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 GJC3Q8NFK1 279 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 SLCO4A1Q96BD0 722 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 FEVQ99581 238 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 NARFLQ9H6Q4 476 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 PNRC2Q9NPJ4 139 aaKnown RBP13.08□□□□□ -0.32
RAB4B-202ENST00000378307 TBC1D23Q9NUY8 699 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.32
RAB4B-202ENST00000378307 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms